PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

927
Candidate Protein Records
703
Pathway-Level Records
1829
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Ccusscaffold_60164240 Alkaloid T3O medium borderline
Ccusscaffold_60165140 Alkaloid T3O medium borderline
Ccusscaffold_60169520 Alkaloid T3O low borderline
Ccusscaffold_60172840 Alkaloid T3O low borderline
Ccusscaffold_60172860 Alkaloid T3O low borderline
Ccusscaffold_60183540 Alkaloid T3O medium borderline
Ccusscaffold_60186400 Alkaloid T3O medium borderline
Ccusscaffold_70211330 Alkaloid T3O medium borderline
Ccusscaffold_80220670 Alkaloid T3O medium borderline
Ccusscaffold_80221810 Alkaloid T3O medium pass
Ccusscaffold_80230070 Alkaloid T3O medium borderline
Ccusscaffold_90243510 Alkaloid T3O medium pass
Ccusscaffold_90247340 Alkaloid T3O medium pass
Ccusscaffold_90249730 Alkaloid T3O medium borderline
Ccusscaffold_20072470 Alkaloid TDC low borderline
Ccusscaffold_40101760 Alkaloid TDC low borderline
Ccusscaffold_40113000 Alkaloid TDC low borderline
Ccusscaffold_50139270 Alkaloid TDC low borderline
Ccusscaffold_50153300 Alkaloid TDC low borderline
Ccusscaffold_100024110 Alkaloid TRI/TRII medium pass
Ccusscaffold_10005490 Alkaloid TRI/TRII medium pass
Ccusscaffold_10005510 Alkaloid TRI/TRII low borderline
Ccusscaffold_50117470 Alkaloid TRI/TRII medium pass
Ccusscaffold_60162220 Alkaloid TRI/TRII medium pass
Ccusscaffold_60164650 Alkaloid TRI/TRII medium pass
Ccusscaffold_60192730 Alkaloid TRI/TRII low borderline
Ccusscaffold_60193700 Alkaloid TRI/TRII low borderline
Ccusscaffold_60193710 Alkaloid TRI/TRII low borderline
Ccusscaffold_60197400 Alkaloid TRI/TRII medium pass
Ccusscaffold_60197440 Alkaloid TRI/TRII medium pass
Ccusscaffold_70200670 Alkaloid TRI/TRII medium pass
Ccusscaffold_70202060 Alkaloid TRI/TRII low borderline
Ccusscaffold_70214100 Alkaloid TRI/TRII low borderline
Ccusscaffold_80232230 Alkaloid TRI/TRII medium pass
Ccusscaffold_80233620 Alkaloid TRI/TRII low borderline
Ccusscaffold_80233630 Alkaloid TRI/TRII low borderline
Ccusscaffold_90242560 Alkaloid TRI/TRII medium pass
Ccusscaffold_20078970 Alkaloid TYDC_DDC medium borderline
Ccusscaffold_50156900 Alkaloid TYDC_DDC medium borderline