PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

927
Candidate Protein Records
703
Pathway-Level Records
1829
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Ccusscaffold_70206670 Alkaloid STR low borderline
Ccusscaffold_70215320 Alkaloid STR low borderline
Ccusscaffold_80222010 Alkaloid STR medium pass
Ccusscaffold_80233420 Alkaloid STR low borderline
Ccusscaffold_90235590 Alkaloid STR low borderline
Ccusscaffold_90238280 Alkaloid STR low borderline
Ccusscaffold_90239160 Alkaloid STR low borderline
Ccusscaffold_90239170 Alkaloid STR low borderline
Ccusscaffold_90247050 Alkaloid STR low borderline
Ccusscaffold_90270860 Alkaloid STR low borderline
Ccusscaffold_90270870 Alkaloid STR low borderline
Ccusscaffold_10005050 Alkaloid T16H medium borderline
Ccusscaffold_10012030 Alkaloid T16H medium borderline
Ccusscaffold_110054760 Alkaloid T16H medium borderline
Ccusscaffold_20083200 Alkaloid T16H medium borderline
Ccusscaffold_30085860 Alkaloid T16H medium borderline
Ccusscaffold_30085870 Alkaloid T16H medium borderline
Ccusscaffold_40109480 Alkaloid T16H medium borderline
Ccusscaffold_40112530 Alkaloid T16H medium borderline
Ccusscaffold_40112560 Alkaloid T16H medium borderline
Ccusscaffold_50118550 Alkaloid T16H medium borderline
Ccusscaffold_50119450 Alkaloid T16H medium borderline
Ccusscaffold_50156210 Alkaloid T16H medium borderline
Ccusscaffold_60182540 Alkaloid T16H medium borderline
Ccusscaffold_60186380 Alkaloid T16H medium borderline
Ccusscaffold_80219810 Alkaloid T16H medium borderline
Ccusscaffold_80223980 Alkaloid T16H medium borderline
Ccusscaffold_10003060 Alkaloid T3O medium pass
Ccusscaffold_100037840 Alkaloid T3O medium borderline
Ccusscaffold_10003910 Alkaloid T3O medium borderline
Ccusscaffold_10005020 Alkaloid T3O medium borderline
Ccusscaffold_110043250 Alkaloid T3O medium borderline
Ccusscaffold_110058040 Alkaloid T3O medium pass
Ccusscaffold_110058050 Alkaloid T3O medium pass
Ccusscaffold_110058380 Alkaloid T3O medium pass
Ccusscaffold_110058390 Alkaloid T3O medium pass
Ccusscaffold_110060130 Alkaloid T3O medium borderline
Ccusscaffold_20075680 Alkaloid T3O medium borderline
Ccusscaffold_20079450 Alkaloid T3O medium pass
Ccusscaffold_20083130 Alkaloid T3O medium pass
Ccusscaffold_20083170 Alkaloid T3O medium pass
Ccusscaffold_30085840 Alkaloid T3O medium pass
Ccusscaffold_30085850 Alkaloid T3O medium pass
Ccusscaffold_30085880 Alkaloid T3O medium pass
Ccusscaffold_40110930 Alkaloid T3O medium pass
Ccusscaffold_40112540 Alkaloid T3O medium borderline
Ccusscaffold_40112570 Alkaloid T3O medium borderline
Ccusscaffold_50118430 Alkaloid T3O medium borderline
Ccusscaffold_50118460 Alkaloid T3O medium borderline
Ccusscaffold_50157980 Alkaloid T3O low borderline