PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Ccusscaffold_50137790 Rosmarinic Acid C4H low borderline
Ccusscaffold_50137800 Rosmarinic Acid C4H medium pass
Ccusscaffold_50142010 Rosmarinic Acid C4H medium pass
Ccusscaffold_50143300 Rosmarinic Acid C4H medium pass
Ccusscaffold_50147380 Rosmarinic Acid C4H medium pass
Ccusscaffold_50153610 Rosmarinic Acid C4H low borderline
Ccusscaffold_50156160 Rosmarinic Acid C4H low borderline
Ccusscaffold_50156210 Rosmarinic Acid C4H low borderline
Ccusscaffold_50156500 Rosmarinic Acid C4H low borderline
Ccusscaffold_60164240 Rosmarinic Acid C4H low borderline
Ccusscaffold_60165140 Rosmarinic Acid C4H low borderline
Ccusscaffold_60167470 Rosmarinic Acid C4H low borderline
Ccusscaffold_60167480 Rosmarinic Acid C4H low borderline
Ccusscaffold_60167560 Rosmarinic Acid C4H low borderline
Ccusscaffold_60167590 Rosmarinic Acid C4H low borderline
Ccusscaffold_60167620 Rosmarinic Acid C4H low borderline
Ccusscaffold_60172200 Rosmarinic Acid C4H low borderline
Ccusscaffold_60179620 Rosmarinic Acid C4H low borderline
Ccusscaffold_60179630 Rosmarinic Acid C4H low borderline
Ccusscaffold_60179710 Rosmarinic Acid C4H low borderline
Ccusscaffold_60179740 Rosmarinic Acid C4H low borderline
Ccusscaffold_60182540 Rosmarinic Acid C4H low borderline
Ccusscaffold_60183540 Rosmarinic Acid C4H medium pass
Ccusscaffold_60183740 Rosmarinic Acid C4H medium pass
Ccusscaffold_60183770 Rosmarinic Acid C4H medium pass
Ccusscaffold_60186380 Rosmarinic Acid C4H medium pass
Ccusscaffold_60186400 Rosmarinic Acid C4H medium pass
Ccusscaffold_60192810 Rosmarinic Acid C4H low borderline
Ccusscaffold_60192830 Rosmarinic Acid C4H low borderline
Ccusscaffold_60194290 Rosmarinic Acid C4H low borderline
Ccusscaffold_60196950 Rosmarinic Acid C4H low borderline
Ccusscaffold_70208850 Rosmarinic Acid C4H low borderline
Ccusscaffold_70208860 Rosmarinic Acid C4H low borderline
Ccusscaffold_70211290 Rosmarinic Acid C4H low borderline
Ccusscaffold_70211330 Rosmarinic Acid C4H medium pass
Ccusscaffold_80219460 Rosmarinic Acid C4H low borderline
Ccusscaffold_80219810 Rosmarinic Acid C4H low borderline
Ccusscaffold_80220670 Rosmarinic Acid C4H low borderline
Ccusscaffold_80221810 Rosmarinic Acid C4H low borderline
Ccusscaffold_80223980 Rosmarinic Acid C4H low borderline
Ccusscaffold_80230070 Rosmarinic Acid C4H low borderline
Ccusscaffold_90235820 Rosmarinic Acid C4H medium pass
Ccusscaffold_90243510 Rosmarinic Acid C4H low borderline
Ccusscaffold_90245900 Rosmarinic Acid C4H low borderline
Ccusscaffold_90245910 Rosmarinic Acid C4H low borderline
Ccusscaffold_90247340 Rosmarinic Acid C4H low borderline
Ccusscaffold_90249730 Rosmarinic Acid C4H low borderline
Ccusscaffold_90250960 Rosmarinic Acid C4H low borderline
Ccusscaffold_90269120 Rosmarinic Acid C4H low borderline
Ccusscaffold_100037990 Rosmarinic Acid CPR medium pass