PlantSME Plant secondary metabolism enzyme database

Calliergonella cuspidata (calliergonella_cuspidata)

Imported from atlas release summary for Calliergonella cuspidata.

703
Candidate Genes
102
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (94)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 176 11 POD (86) View species results
Terpenoid pathway 167 19 BAHD (65) View species results
Alkaloid pathway 137 18 PYKS (29) View species results
Flavonoid pathway 107 12 CHS (29) View species results
Rosmarinic acid pathway 76 7 PAL (26) View species results
Steroid pathway 40 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 739 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 108 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Ccusscaffold_50149150 Rosmarinic Acid CPR low borderline
Ccusscaffold_60189670 Rosmarinic Acid CPR medium pass
Ccusscaffold_80220050 Rosmarinic Acid CPR medium pass
Ccusscaffold_90250610 Rosmarinic Acid CPR medium pass
Ccusscaffold_40112930 Rosmarinic Acid HPPR medium pass
Ccusscaffold_100025930 Rosmarinic Acid PAL medium pass
Ccusscaffold_100029600 Rosmarinic Acid PAL medium pass
Ccusscaffold_100036000 Rosmarinic Acid PAL medium pass
Ccusscaffold_110050360 Rosmarinic Acid PAL high pass
Ccusscaffold_110050390 Rosmarinic Acid PAL high pass
Ccusscaffold_110050420 Rosmarinic Acid PAL high pass
Ccusscaffold_110053300 Rosmarinic Acid PAL high pass
Ccusscaffold_110053340 Rosmarinic Acid PAL high pass
Ccusscaffold_110053370 Rosmarinic Acid PAL medium pass
Ccusscaffold_110053410 Rosmarinic Acid PAL high pass
Ccusscaffold_130065100 Rosmarinic Acid PAL low borderline
Ccusscaffold_30087060 Rosmarinic Acid PAL high pass
Ccusscaffold_40103360 Rosmarinic Acid PAL high pass
Ccusscaffold_50143370 Rosmarinic Acid PAL low borderline
Ccusscaffold_50143380 Rosmarinic Acid PAL medium pass
Ccusscaffold_70201000 Rosmarinic Acid PAL high pass
Ccusscaffold_70201050 Rosmarinic Acid PAL high pass
Ccusscaffold_90262020 Rosmarinic Acid PAL high pass
Ccusscaffold_90262050 Rosmarinic Acid PAL high pass
Ccusscaffold_90262060 Rosmarinic Acid PAL medium pass
Ccusscaffold_90262100 Rosmarinic Acid PAL medium pass
Ccusscaffold_90262110 Rosmarinic Acid PAL high pass
Ccusscaffold_90262150 Rosmarinic Acid PAL high pass
Ccusscaffold_90262160 Rosmarinic Acid PAL high pass
Ccusscaffold_90262180 Rosmarinic Acid PAL medium pass
Ccusscaffold_90262190 Rosmarinic Acid PAL high pass
Ccusscaffold_90262210 Rosmarinic Acid PAL medium pass
Ccusscaffold_90262220 Rosmarinic Acid PAL high pass
Ccusscaffold_100021920 Rosmarinic Acid RAS medium pass
Ccusscaffold_100027600 Rosmarinic Acid RAS low borderline
Ccusscaffold_110049030 Rosmarinic Acid RAS low borderline
Ccusscaffold_110049070 Rosmarinic Acid RAS low borderline
Ccusscaffold_30084740 Rosmarinic Acid RAS low borderline
Ccusscaffold_50125950 Rosmarinic Acid RAS medium pass
Ccusscaffold_70203150 Rosmarinic Acid RAS medium pass
Ccusscaffold_70210210 Rosmarinic Acid RAS low borderline
Ccusscaffold_90253100 Rosmarinic Acid RAS medium pass
Ccusscaffold_90269020 Rosmarinic Acid RAS medium pass
Ccusscaffold_50119020 Rosmarinic Acid TAT medium pass
Ccusscaffold_60161620 Rosmarinic Acid TAT medium pass
Ccusscaffold_60167250 Rosmarinic Acid TAT medium pass
Ccusscaffold_80221510 Rosmarinic Acid TAT medium pass
Ccusscaffold_90258210 Rosmarinic Acid TAT low borderline