PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Gbil07G0013490.1 Alkaloid GES medium pass
Gbil08G0004720.1 Alkaloid GES medium pass
Gbil08G0004730.1 Alkaloid GES medium pass
Gbil08G0004760.1 Alkaloid GES medium pass
Gbil08G0004770.1 Alkaloid GES medium pass
Gbil08G0004800.1 Alkaloid GES medium pass
Gbil08G0005230.1 Alkaloid GES medium pass
Gbil08G0005250.1 Alkaloid GES medium pass
Gbil08G0005270.1 Alkaloid GES medium pass
Gbil08G0018030.1 Alkaloid GES medium pass
Gbil08G0018040.1 Alkaloid GES medium pass
Gbil09G0007340.1 Alkaloid GES low borderline
Gbil09G0007350.1 Alkaloid GES low borderline
Gbil10G0009880.1 Alkaloid GES medium pass
Gbil10G0013260.1 Alkaloid GES medium pass
Gbil10G0013270.1 Alkaloid GES medium pass
Gbil10G0015620.1 Alkaloid GES medium pass
Gbil10G0015660.1 Alkaloid GES medium pass
Gbil10G0015690.1 Alkaloid GES medium pass
Gbil12G0010120.1 Alkaloid GES medium pass
Gbil12G0010130.1 Alkaloid GES medium pass
Gbil12G0010160.1 Alkaloid GES medium pass
Gbil01G0009740.1 Alkaloid GS low borderline
Gbil01G0016220.1 Alkaloid GS low borderline
Gbil01G0029810.1 Alkaloid GS low borderline
Gbil02G0002890.1 Alkaloid GS low borderline
Gbil02G0002910.1 Alkaloid GS low borderline
Gbil02G0015090.1 Alkaloid GS low borderline
Gbil02G0015100.1 Alkaloid GS low borderline
Gbil04G0005380.1 Alkaloid GS high pass
Gbil04G0009970.1 Alkaloid GS medium pass
Gbil04G0012060.1 Alkaloid GS low borderline
Gbil04G0016020.1 Alkaloid GS high pass
Gbil04G0021770.1 Alkaloid GS high pass
Gbil04G0021780.1 Alkaloid GS high pass
Gbil04G0021790.1 Alkaloid GS high pass
Gbil04G0022920.1 Alkaloid GS medium pass
Gbil05G0007670.1 Alkaloid GS low borderline
Gbil05G0017930.1 Alkaloid GS low borderline
Gbil05G0017940.1 Alkaloid GS low borderline
Gbil05G0017970.1 Alkaloid GS low borderline
Gbil05G0018430.1 Alkaloid GS low borderline
Gbil06G0009290.1 Alkaloid GS medium pass
Gbil06G0010280.1 Alkaloid GS high pass
Gbil07G0000530.1 Alkaloid GS low borderline
Gbil07G0012550.1 Alkaloid GS medium pass
Gbil09G0006690.1 Alkaloid GS low borderline
Gbil10G0008050.1 Alkaloid GS low borderline
Gbil01G0009800.1 Alkaloid H6H low borderline
Gbil01G0024330.1 Alkaloid H6H medium borderline