PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Gbil02G0006790.1 Alkaloid G8O/G8H medium borderline
Gbil02G0014460.1 Alkaloid G8O/G8H low borderline
Gbil02G0014620.1 Alkaloid G8O/G8H medium borderline
Gbil02G0014640.1 Alkaloid G8O/G8H medium borderline
Gbil02G0017180.1 Alkaloid G8O/G8H medium borderline
Gbil03G0001640.1 Alkaloid G8O/G8H medium borderline
Gbil03G0009600.1 Alkaloid G8O/G8H medium borderline
Gbil03G0012490.1 Alkaloid G8O/G8H medium borderline
Gbil03G0012510.1 Alkaloid G8O/G8H medium borderline
Gbil03G0012540.1 Alkaloid G8O/G8H medium borderline
Gbil03G0012670.1 Alkaloid G8O/G8H medium borderline
Gbil03G0018030.1 Alkaloid G8O/G8H medium borderline
Gbil05G0006370.1 Alkaloid G8O/G8H medium borderline
Gbil05G0007840.1 Alkaloid G8O/G8H medium borderline
Gbil05G0009470.1 Alkaloid G8O/G8H medium borderline
Gbil05G0009740.1 Alkaloid G8O/G8H medium borderline
Gbil05G0020320.1 Alkaloid G8O/G8H medium borderline
Gbil05G0020330.1 Alkaloid G8O/G8H medium borderline
Gbil06G0002420.1 Alkaloid G8O/G8H medium borderline
Gbil06G0002430.1 Alkaloid G8O/G8H medium borderline
Gbil06G0005140.1 Alkaloid G8O/G8H medium borderline
Gbil06G0007230.1 Alkaloid G8O/G8H medium borderline
Gbil06G0007360.1 Alkaloid G8O/G8H medium borderline
Gbil06G0007370.1 Alkaloid G8O/G8H medium borderline
Gbil06G0007770.1 Alkaloid G8O/G8H medium borderline
Gbil06G0019720.1 Alkaloid G8O/G8H low borderline
Gbil08G0004010.1 Alkaloid G8O/G8H medium borderline
Gbil08G0004020.1 Alkaloid G8O/G8H medium borderline
Gbil08G0004030.1 Alkaloid G8O/G8H medium borderline
Gbil08G0004040.1 Alkaloid G8O/G8H medium borderline
Gbil08G0016570.1 Alkaloid G8O/G8H medium borderline
Gbil08G0017660.1 Alkaloid G8O/G8H medium borderline
Gbil09G0008690.1 Alkaloid G8O/G8H medium borderline
Gbil09G0012730.1 Alkaloid G8O/G8H medium borderline
Gbilctg1592190000940.1 Alkaloid G8O/G8H medium borderline
Gbilctg251580001700.1 Alkaloid G8O/G8H medium borderline
Gbil01G0020060.1 Alkaloid GES medium pass
Gbil01G0020130.1 Alkaloid GES medium pass
Gbil01G0026760.1 Alkaloid GES low borderline
Gbil03G0007130.1 Alkaloid GES medium pass
Gbil03G0017240.1 Alkaloid GES medium pass
Gbil03G0017330.1 Alkaloid GES medium pass
Gbil03G0017980.1 Alkaloid GES medium pass
Gbil03G0018010.1 Alkaloid GES low borderline
Gbil03G0020740.1 Alkaloid GES medium pass
Gbil05G0007190.1 Alkaloid GES medium pass
Gbil05G0007860.1 Alkaloid GES medium pass
Gbil05G0007900.1 Alkaloid GES medium pass
Gbil05G0007950.1 Alkaloid GES medium pass
Gbil05G0012460.1 Alkaloid GES medium pass