PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Gbil07G0002130.1 Alkaloid COR medium pass
Gbil07G0020100.1 Alkaloid COR medium pass
Gbil07G0020110.1 Alkaloid COR medium pass
Gbil07G0020120.1 Alkaloid COR medium pass
Gbil07G0020130.1 Alkaloid COR medium pass
Gbil07G0020140.1 Alkaloid COR medium pass
Gbil07G0020160.1 Alkaloid COR medium pass
Gbil07G0020170.1 Alkaloid COR medium pass
Gbil07G0020210.1 Alkaloid COR medium pass
Gbil07G0020970.1 Alkaloid COR medium pass
Gbil08G0004590.1 Alkaloid COR medium pass
Gbil09G0001440.1 Alkaloid COR medium pass
Gbil09G0001450.1 Alkaloid COR medium pass
Gbil09G0001460.1 Alkaloid COR medium pass
Gbil09G0001480.1 Alkaloid COR medium pass
Gbil01G0006810.1 Alkaloid CYP719 medium borderline
Gbil01G0013840.1 Alkaloid CYP719 medium borderline
Gbil01G0014670.1 Alkaloid CYP719 medium borderline
Gbil02G0009040.1 Alkaloid CYP719 low borderline
Gbil02G0013380.1 Alkaloid CYP719 medium borderline
Gbil03G0022520.1 Alkaloid CYP719 medium borderline
Gbil03G0022530.1 Alkaloid CYP719 medium borderline
Gbil03G0022540.1 Alkaloid CYP719 medium borderline
Gbil03G0022830.1 Alkaloid CYP719 medium borderline
Gbil04G0015510.1 Alkaloid CYP719 medium borderline
Gbil04G0015520.1 Alkaloid CYP719 medium borderline
Gbil05G0007970.1 Alkaloid CYP719 medium borderline
Gbil08G0006960.1 Alkaloid CYP719 medium borderline
Gbil08G0018730.1 Alkaloid CYP719 medium borderline
Gbil09G0011050.1 Alkaloid CYP719 medium borderline
Gbil10G0006860.1 Alkaloid CYP719 medium borderline
Gbil10G0016930.1 Alkaloid CYP719 medium borderline
Gbil10G0016940.1 Alkaloid CYP719 medium borderline
Gbil10G0016950.1 Alkaloid CYP719 medium borderline
Gbil10G0016960.1 Alkaloid CYP719 medium borderline
Gbil12G0006590.1 Alkaloid CYP719 medium borderline
Gbil04G0003020.1 Alkaloid CYP80B1 medium borderline
Gbil05G0006330.1 Alkaloid CYP80B1 medium borderline
Gbil05G0007850.1 Alkaloid CYP80B1 medium borderline
Gbil05G0010460.1 Alkaloid CYP80B1 medium borderline
Gbil05G0020260.1 Alkaloid CYP80B1 low borderline
Gbil07G0003320.1 Alkaloid CYP80B1 medium borderline
Gbil08G0006940.1 Alkaloid CYP80B1 medium borderline
Gbil01G0001420.1 Alkaloid G8O/G8H medium borderline
Gbil01G0001430.1 Alkaloid G8O/G8H medium borderline
Gbil01G0014430.1 Alkaloid G8O/G8H medium borderline
Gbil01G0014640.1 Alkaloid G8O/G8H medium borderline
Gbil01G0020910.1 Alkaloid G8O/G8H medium borderline
Gbil02G0005750.1 Alkaloid G8O/G8H medium borderline
Gbil02G0005770.1 Alkaloid G8O/G8H medium borderline