PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Gbil10G0012500.1 Rosmarinic Acid 4CL medium pass
Gbil10G0012510.1 Rosmarinic Acid 4CL medium pass
Gbil11G0008160.1 Rosmarinic Acid 4CL medium pass
Gbil11G0014360.1 Rosmarinic Acid 4CL medium pass
Gbil11G0014370.1 Rosmarinic Acid 4CL medium pass
Gbil11G0014380.1 Rosmarinic Acid 4CL medium pass
Gbil11G0014390.1 Rosmarinic Acid 4CL medium pass
Gbil11G0014400.1 Rosmarinic Acid 4CL medium pass
Gbil11G0016300.1 Rosmarinic Acid 4CL low borderline
Gbil11G0016310.1 Rosmarinic Acid 4CL low borderline
Gbil11G0017290.1 Rosmarinic Acid 4CL low borderline
Gbil12G0000780.1 Rosmarinic Acid 4CL medium pass
Gbil12G0007910.1 Rosmarinic Acid 4CL low borderline
Gbil12G0007920.1 Rosmarinic Acid 4CL medium pass
Gbil12G0012610.1 Rosmarinic Acid 4CL low borderline
Gbil12G0012620.1 Rosmarinic Acid 4CL low borderline
Gbil01G0000080.1 Rosmarinic Acid C4H low borderline
Gbil01G0000820.1 Rosmarinic Acid C4H low borderline
Gbil01G0001050.1 Rosmarinic Acid C4H medium pass
Gbil01G0001290.1 Rosmarinic Acid C4H medium pass
Gbil01G0001300.1 Rosmarinic Acid C4H medium pass
Gbil01G0001420.1 Rosmarinic Acid C4H medium pass
Gbil01G0001430.1 Rosmarinic Acid C4H low borderline
Gbil01G0001440.1 Rosmarinic Acid C4H medium pass
Gbil01G0002130.1 Rosmarinic Acid C4H low borderline
Gbil01G0003920.1 Rosmarinic Acid C4H low borderline
Gbil01G0006810.1 Rosmarinic Acid C4H low borderline
Gbil01G0007860.1 Rosmarinic Acid C4H medium pass
Gbil01G0013840.1 Rosmarinic Acid C4H low borderline
Gbil01G0014380.1 Rosmarinic Acid C4H low borderline
Gbil01G0014430.1 Rosmarinic Acid C4H low borderline
Gbil01G0014640.1 Rosmarinic Acid C4H low borderline
Gbil01G0014670.1 Rosmarinic Acid C4H low borderline
Gbil01G0015890.1 Rosmarinic Acid C4H medium pass
Gbil01G0015970.1 Rosmarinic Acid C4H low borderline
Gbil01G0021250.1 Rosmarinic Acid C4H low borderline
Gbil01G0021650.1 Rosmarinic Acid C4H medium pass
Gbil01G0021800.1 Rosmarinic Acid C4H low borderline
Gbil01G0022930.1 Rosmarinic Acid C4H medium pass
Gbil01G0025770.1 Rosmarinic Acid C4H low borderline
Gbil01G0030040.1 Rosmarinic Acid C4H low borderline
Gbil02G0000400.1 Rosmarinic Acid C4H low borderline
Gbil02G0005090.1 Rosmarinic Acid C4H medium pass
Gbil02G0005720.1 Rosmarinic Acid C4H medium pass
Gbil02G0005730.1 Rosmarinic Acid C4H medium pass
Gbil02G0005740.1 Rosmarinic Acid C4H medium pass
Gbil02G0005750.1 Rosmarinic Acid C4H low borderline
Gbil02G0005760.1 Rosmarinic Acid C4H medium pass
Gbil02G0005770.1 Rosmarinic Acid C4H medium pass
Gbil02G0005780.1 Rosmarinic Acid C4H low borderline