PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Gbil02G0006790.1 Rosmarinic Acid C4H low borderline
Gbil02G0007200.1 Rosmarinic Acid C4H medium pass
Gbil02G0007230.1 Rosmarinic Acid C4H medium pass
Gbil02G0007390.1 Rosmarinic Acid C4H medium pass
Gbil02G0008140.1 Rosmarinic Acid C4H medium pass
Gbil02G0008420.1 Rosmarinic Acid C4H low borderline
Gbil02G0008440.1 Rosmarinic Acid C4H low borderline
Gbil02G0009140.1 Rosmarinic Acid C4H medium pass
Gbil02G0009150.1 Rosmarinic Acid C4H medium pass
Gbil02G0013330.1 Rosmarinic Acid C4H medium pass
Gbil02G0013380.1 Rosmarinic Acid C4H low borderline
Gbil02G0013390.1 Rosmarinic Acid C4H low borderline
Gbil02G0013580.1 Rosmarinic Acid C4H medium pass
Gbil02G0014000.1 Rosmarinic Acid C4H low borderline
Gbil02G0014010.1 Rosmarinic Acid C4H medium pass
Gbil02G0014400.1 Rosmarinic Acid C4H medium pass
Gbil02G0014450.1 Rosmarinic Acid C4H medium pass
Gbil02G0014460.1 Rosmarinic Acid C4H low borderline
Gbil02G0014470.1 Rosmarinic Acid C4H medium pass
Gbil02G0014490.1 Rosmarinic Acid C4H medium pass
Gbil02G0014590.1 Rosmarinic Acid C4H medium pass
Gbil02G0014600.1 Rosmarinic Acid C4H medium pass
Gbil02G0014610.1 Rosmarinic Acid C4H low borderline
Gbil02G0014620.1 Rosmarinic Acid C4H low borderline
Gbil02G0014630.1 Rosmarinic Acid C4H low borderline
Gbil02G0014640.1 Rosmarinic Acid C4H low borderline
Gbil02G0014770.1 Rosmarinic Acid C4H medium pass
Gbil02G0014800.1 Rosmarinic Acid C4H medium pass
Gbil02G0014810.1 Rosmarinic Acid C4H medium pass
Gbil02G0014820.1 Rosmarinic Acid C4H medium pass
Gbil02G0014910.1 Rosmarinic Acid C4H low borderline
Gbil02G0014970.1 Rosmarinic Acid C4H low borderline
Gbil02G0015120.1 Rosmarinic Acid C4H medium pass
Gbil02G0015810.1 Rosmarinic Acid C4H medium pass
Gbil02G0015890.1 Rosmarinic Acid C4H medium pass
Gbil02G0017160.1 Rosmarinic Acid C4H medium pass
Gbil02G0017170.1 Rosmarinic Acid C4H low borderline
Gbil02G0017180.1 Rosmarinic Acid C4H medium pass
Gbil02G0017190.1 Rosmarinic Acid C4H medium pass
Gbil02G0019670.1 Rosmarinic Acid C4H low borderline
Gbil02G0019700.1 Rosmarinic Acid C4H low borderline
Gbil02G0021340.1 Rosmarinic Acid C4H medium pass
Gbil02G0021910.1 Rosmarinic Acid C4H low borderline
Gbil03G0000370.1 Rosmarinic Acid C4H low borderline
Gbil03G0000390.1 Rosmarinic Acid C4H low borderline
Gbil03G0000630.1 Rosmarinic Acid C4H low borderline
Gbil03G0000820.1 Rosmarinic Acid C4H low borderline
Gbil03G0000830.1 Rosmarinic Acid C4H medium pass
Gbil03G0000840.1 Rosmarinic Acid C4H medium pass
Gbil03G0000850.1 Rosmarinic Acid C4H medium pass