PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Gbil01G0031330.1 Flavonoid F3H medium borderline
Gbil02G0000820.1 Flavonoid F3H medium borderline
Gbil02G0000830.1 Flavonoid F3H medium borderline
Gbil02G0003850.1 Flavonoid F3H medium borderline
Gbil02G0003860.1 Flavonoid F3H medium borderline
Gbil02G0003870.1 Flavonoid F3H medium borderline
Gbil02G0003920.1 Flavonoid F3H medium borderline
Gbil02G0003930.1 Flavonoid F3H medium borderline
Gbil02G0003940.1 Flavonoid F3H medium borderline
Gbil02G0003950.1 Flavonoid F3H medium borderline
Gbil02G0004660.1 Flavonoid F3H medium borderline
Gbil02G0004670.1 Flavonoid F3H medium borderline
Gbil02G0004680.1 Flavonoid F3H medium borderline
Gbil02G0004710.1 Flavonoid F3H medium borderline
Gbil02G0004750.1 Flavonoid F3H medium borderline
Gbil02G0005260.1 Flavonoid F3H low borderline
Gbil02G0005790.1 Flavonoid F3H medium pass
Gbil02G0011150.1 Flavonoid F3H low borderline
Gbil02G0020520.1 Flavonoid F3H medium borderline
Gbil02G0020770.1 Flavonoid F3H medium borderline
Gbil02G0020780.1 Flavonoid F3H medium borderline
Gbil03G0003640.1 Flavonoid F3H medium borderline
Gbil03G0003650.1 Flavonoid F3H medium borderline
Gbil03G0003660.1 Flavonoid F3H medium borderline
Gbil03G0003670.1 Flavonoid F3H medium borderline
Gbil03G0003680.1 Flavonoid F3H medium borderline
Gbil03G0005140.1 Flavonoid F3H medium borderline
Gbil03G0007560.1 Flavonoid F3H medium borderline
Gbil03G0010940.1 Flavonoid F3H medium borderline
Gbil03G0022550.1 Flavonoid F3H medium borderline
Gbil04G0008840.1 Flavonoid F3H low borderline
Gbil04G0008860.1 Flavonoid F3H medium borderline
Gbil04G0020740.1 Flavonoid F3H medium borderline
Gbil04G0020750.1 Flavonoid F3H medium borderline
Gbil05G0002720.1 Flavonoid F3H medium borderline
Gbil05G0003430.1 Flavonoid F3H medium borderline
Gbil05G0003440.1 Flavonoid F3H low borderline
Gbil05G0003470.1 Flavonoid F3H low borderline
Gbil05G0004470.1 Flavonoid F3H medium borderline
Gbil05G0010180.1 Flavonoid F3H medium borderline
Gbil05G0010210.1 Flavonoid F3H medium borderline
Gbil05G0010220.1 Flavonoid F3H medium borderline
Gbil05G0011130.1 Flavonoid F3H medium borderline
Gbil05G0016570.1 Flavonoid F3H medium borderline
Gbil05G0016590.1 Flavonoid F3H medium borderline
Gbil05G0017830.1 Flavonoid F3H medium borderline
Gbil05G0017840.1 Flavonoid F3H medium borderline
Gbil06G0007930.1 Flavonoid F3H medium borderline
Gbil06G0012240.1 Flavonoid F3H medium borderline
Gbil06G0014070.1 Flavonoid F3H medium borderline