PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Gbil07G0003530.1 Flavonoid F3H medium borderline
Gbil07G0006050.1 Flavonoid F3H medium borderline
Gbil07G0006060.1 Flavonoid F3H medium borderline
Gbil07G0006070.1 Flavonoid F3H medium borderline
Gbil07G0009960.1 Flavonoid F3H low borderline
Gbil07G0012660.1 Flavonoid F3H medium borderline
Gbil07G0021020.1 Flavonoid F3H low borderline
Gbil07G0021030.1 Flavonoid F3H low borderline
Gbil08G0008520.1 Flavonoid F3H medium borderline
Gbil08G0010670.1 Flavonoid F3H medium borderline
Gbil08G0010680.1 Flavonoid F3H medium borderline
Gbil08G0018820.1 Flavonoid F3H medium borderline
Gbil08G0019720.1 Flavonoid F3H medium borderline
Gbil09G0001840.1 Flavonoid F3H medium borderline
Gbil09G0001850.1 Flavonoid F3H medium borderline
Gbil09G0001860.1 Flavonoid F3H medium borderline
Gbil09G0001870.1 Flavonoid F3H medium borderline
Gbil09G0001880.1 Flavonoid F3H medium borderline
Gbil09G0002190.1 Flavonoid F3H medium borderline
Gbil09G0002960.1 Flavonoid F3H medium borderline
Gbil09G0003280.1 Flavonoid F3H medium borderline
Gbil09G0004930.1 Flavonoid F3H medium borderline
Gbil09G0004940.1 Flavonoid F3H medium borderline
Gbil09G0014110.1 Flavonoid F3H medium borderline
Gbil09G0018800.1 Flavonoid F3H medium borderline
Gbil09G0019220.1 Flavonoid F3H medium borderline
Gbil10G0012060.1 Flavonoid F3H medium borderline
Gbil10G0015250.1 Flavonoid F3H medium borderline
Gbil10G0019410.1 Flavonoid F3H medium borderline
Gbil10G0019420.1 Flavonoid F3H medium borderline
Gbil10G0019430.1 Flavonoid F3H medium borderline
Gbil10G0019560.1 Flavonoid F3H medium borderline
Gbil10G0019570.1 Flavonoid F3H medium borderline
Gbil10G0019580.1 Flavonoid F3H medium borderline
Gbil10G0019590.1 Flavonoid F3H low borderline
Gbil11G0008260.1 Flavonoid F3H medium borderline
Gbil11G0008270.1 Flavonoid F3H medium borderline
Gbil11G0008400.1 Flavonoid F3H medium pass
Gbil11G0008410.1 Flavonoid F3H medium borderline
Gbil11G0008420.1 Flavonoid F3H medium borderline
Gbil11G0008430.1 Flavonoid F3H medium borderline
Gbil11G0011490.1 Flavonoid F3H medium borderline
Gbil11G0011930.1 Flavonoid F3H medium borderline
Gbil11G0011980.1 Flavonoid F3H medium borderline
Gbil11G0012550.1 Flavonoid F3H medium borderline
Gbil11G0012580.1 Flavonoid F3H medium borderline
Gbil11G0013190.1 Flavonoid F3H medium borderline
Gbil12G0004770.1 Flavonoid F3H medium borderline
Gbil12G0005830.1 Flavonoid F3H low borderline
Gbil12G0006520.1 Flavonoid F3H medium borderline