PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Gbil12G0006530.1 Flavonoid F3H low borderline
Gbil12G0006540.1 Flavonoid F3H low borderline
Gbil12G0006550.1 Flavonoid F3H medium borderline
Gbil12G0008290.1 Flavonoid F3H medium borderline
Gbil12G0008300.1 Flavonoid F3H medium borderline
Gbil12G0008320.1 Flavonoid F3H medium borderline
Gbil12G0009200.1 Flavonoid F3H medium borderline
Gbil12G0010450.1 Flavonoid F3H medium borderline
Gbil12G0010460.1 Flavonoid F3H medium borderline
Gbil12G0010470.1 Flavonoid F3H medium borderline
Gbil12G0010480.1 Flavonoid F3H medium borderline
Gbil12G0010490.1 Flavonoid F3H medium borderline
Gbil12G0010500.1 Flavonoid F3H medium borderline
Gbil12G0010510.1 Flavonoid F3H medium borderline
Gbil12G0014150.1 Flavonoid F3H medium borderline
Gbil12G0017090.1 Flavonoid F3H medium borderline
Gbilctg143740000780.1 Flavonoid F3H medium borderline
Gbil01G0031350.1 Flavonoid FLS low borderline
Gbil01G0009810.1 Flavonoid FNS medium borderline
Gbil01G0019420.1 Flavonoid FNS low borderline
Gbil01G0020910.1 Flavonoid FNS medium borderline
Gbil02G0013260.1 Flavonoid FNS medium borderline
Gbil02G0014460.1 Flavonoid FNS medium borderline
Gbil03G0022560.1 Flavonoid FNS medium borderline
Gbil04G0003020.1 Flavonoid FNS medium borderline
Gbil05G0005650.1 Flavonoid FNS medium borderline
Gbil05G0005670.1 Flavonoid FNS medium borderline
Gbil05G0005680.1 Flavonoid FNS medium borderline
Gbil05G0005700.1 Flavonoid FNS medium borderline
Gbil05G0006330.1 Flavonoid FNS medium borderline
Gbil05G0007960.1 Flavonoid FNS medium borderline
Gbil05G0007970.1 Flavonoid FNS medium borderline
Gbil05G0007980.1 Flavonoid FNS medium borderline
Gbil05G0013490.1 Flavonoid FNS medium borderline
Gbil06G0005140.1 Flavonoid FNS medium borderline
Gbil06G0005240.1 Flavonoid FNS medium borderline
Gbil07G0001160.1 Flavonoid FNS medium borderline
Gbil08G0017720.1 Flavonoid FNS medium borderline
Gbil08G0018250.1 Flavonoid FNS medium borderline
Gbil09G0013990.1 Flavonoid FNS medium borderline
Gbil09G0014000.1 Flavonoid FNS medium borderline
Gbil10G0019280.1 Flavonoid FNS medium borderline
Gbil01G0001650.1 Flavonoid IFR high pass
Gbil01G0001660.1 Flavonoid IFR high pass
Gbil01G0025180.1 Flavonoid IFR low borderline
Gbil01G0025680.1 Flavonoid IFR low borderline
Gbil02G0000620.1 Flavonoid IFR high pass
Gbil02G0000630.1 Flavonoid IFR high pass
Gbil02G0009660.1 Flavonoid IFR high pass
Gbil02G0010100.1 Flavonoid IFR high pass