PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

1873
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Gbil04G0003880.1 Alkaloid 7DLH low borderline
Gbil05G0012280.1 Alkaloid 7DLH medium borderline
Gbil05G0012640.1 Alkaloid 7DLH medium borderline
Gbil05G0017470.1 Alkaloid 7DLH medium borderline
Gbil06G0019790.1 Alkaloid 7DLH medium borderline
Gbil08G0008150.1 Alkaloid 7DLH medium borderline
Gbil08G0008700.1 Alkaloid 7DLH medium borderline
Gbil08G0019670.1 Alkaloid 7DLH medium borderline
Gbil09G0014000.1 Alkaloid 7DLH medium borderline
Gbil10G0020270.1 Alkaloid 7DLH medium borderline
Gbil12G0007600.1 Alkaloid 7DLH medium borderline
Gbil12G0016690.1 Alkaloid 7DLH medium borderline
Gbil12G0018590.1 Alkaloid 7DLH medium borderline
Gbil12G0018630.1 Alkaloid 7DLH medium borderline
Gbil03G0019920.1 Alkaloid 8HGO low borderline
Gbil03G0021980.1 Alkaloid 8HGO medium borderline
Gbil04G0006580.1 Alkaloid 8HGO medium borderline
Gbil04G0006660.1 Alkaloid 8HGO medium pass
Gbil04G0006670.1 Alkaloid 8HGO medium borderline
Gbil04G0006710.1 Alkaloid 8HGO medium borderline
Gbil04G0006720.1 Alkaloid 8HGO medium borderline
Gbil04G0006730.1 Alkaloid 8HGO medium borderline
Gbil04G0006740.1 Alkaloid 8HGO medium borderline
Gbil04G0013640.1 Alkaloid 8HGO medium borderline
Gbil04G0013700.1 Alkaloid 8HGO medium borderline
Gbil04G0013710.1 Alkaloid 8HGO medium borderline
Gbil04G0013720.1 Alkaloid 8HGO medium borderline
Gbil06G0002200.1 Alkaloid 8HGO medium borderline
Gbil06G0003190.1 Alkaloid 8HGO low borderline
Gbil07G0003830.1 Alkaloid 8HGO medium borderline
Gbil11G0017490.1 Alkaloid 8HGO low borderline
Gbil12G0002240.1 Alkaloid 8HGO medium borderline
Gbil12G0002250.1 Alkaloid 8HGO medium borderline
Gbil02G0021980.1 Alkaloid ADC low borderline
Gbil09G0005660.1 Alkaloid ADC medium pass
Gbil09G0015660.1 Alkaloid ADC low borderline
Gbil11G0012270.1 Alkaloid ADC medium pass
Gbil11G0017080.1 Alkaloid ADC low borderline
Gbil04G0015920.1 Alkaloid BBE medium borderline
Gbil05G0002520.1 Alkaloid BBE medium borderline
Gbil05G0002530.1 Alkaloid BBE medium borderline
Gbil05G0002540.1 Alkaloid BBE medium borderline
Gbil05G0002550.1 Alkaloid BBE medium borderline
Gbil05G0002560.1 Alkaloid BBE medium borderline
Gbil05G0002570.1 Alkaloid BBE medium borderline
Gbil05G0002580.1 Alkaloid BBE medium borderline
Gbil05G0002590.1 Alkaloid BBE medium borderline
Gbilctg630010002750.1 Alkaloid BBE medium borderline
Gbil03G0004740.1 Alkaloid CNMT low borderline
Gbil08G0010010.1 Alkaloid CNMT low borderline