PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Gbil09G0019910.1 Alkaloid CNMT low borderline
Gbil10G0007880.1 Alkaloid CNMT low borderline
Gbil10G0007910.1 Alkaloid CNMT low borderline
Gbil10G0007920.1 Alkaloid CNMT low borderline
Gbil12G0007080.1 Alkaloid CNMT low borderline
Gbil12G0013380.1 Alkaloid CNMT low borderline
Gbil01G0000950.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0002410.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0009940.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0009960.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0010010.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0011700.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0017500.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0019440.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0019870.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0026100.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0026110.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0026130.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0026140.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0027820.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0027840.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0027870.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0027880.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0027930.1 Alkaloid CODM/T6ODM medium borderline
Gbil01G0031330.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0000820.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0000830.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0003920.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0003930.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0003940.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0003950.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0004660.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0004670.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0004680.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0004710.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0004750.1 Alkaloid CODM/T6ODM medium borderline
Gbil02G0005250.1 Alkaloid CODM/T6ODM medium borderline
Gbil03G0005140.1 Alkaloid CODM/T6ODM medium borderline
Gbil03G0010940.1 Alkaloid CODM/T6ODM medium borderline
Gbil04G0008840.1 Alkaloid CODM/T6ODM medium borderline
Gbil04G0008860.1 Alkaloid CODM/T6ODM medium borderline
Gbil05G0004470.1 Alkaloid CODM/T6ODM medium borderline
Gbil05G0010180.1 Alkaloid CODM/T6ODM medium borderline
Gbil05G0011130.1 Alkaloid CODM/T6ODM medium borderline
Gbil05G0016570.1 Alkaloid CODM/T6ODM medium borderline
Gbil06G0004720.1 Alkaloid CODM/T6ODM medium borderline
Gbil06G0007930.1 Alkaloid CODM/T6ODM medium borderline
Gbil06G0012240.1 Alkaloid CODM/T6ODM medium borderline
Gbil07G0003530.1 Alkaloid CODM/T6ODM medium borderline
Gbil07G0006050.1 Alkaloid CODM/T6ODM medium borderline