PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Gbil06G0005310.1 Rosmarinic Acid C4H low borderline
Gbil06G0005930.1 Rosmarinic Acid C4H medium pass
Gbil06G0007230.1 Rosmarinic Acid C4H medium pass
Gbil06G0007340.1 Rosmarinic Acid C4H medium pass
Gbil06G0007350.1 Rosmarinic Acid C4H low borderline
Gbil06G0007360.1 Rosmarinic Acid C4H medium pass
Gbil06G0007370.1 Rosmarinic Acid C4H low borderline
Gbil06G0007730.1 Rosmarinic Acid C4H low borderline
Gbil06G0007740.1 Rosmarinic Acid C4H low borderline
Gbil06G0007770.1 Rosmarinic Acid C4H low borderline
Gbil06G0012230.1 Rosmarinic Acid C4H low borderline
Gbil06G0014230.1 Rosmarinic Acid C4H low borderline
Gbil06G0019790.1 Rosmarinic Acid C4H low borderline
Gbil06G0022360.1 Rosmarinic Acid C4H low borderline
Gbil07G0001160.1 Rosmarinic Acid C4H low borderline
Gbil07G0001170.1 Rosmarinic Acid C4H low borderline
Gbil07G0001180.1 Rosmarinic Acid C4H low borderline
Gbil07G0001190.1 Rosmarinic Acid C4H low borderline
Gbil07G0003510.1 Rosmarinic Acid C4H low borderline
Gbil07G0003650.1 Rosmarinic Acid C4H low borderline
Gbil07G0004550.1 Rosmarinic Acid C4H medium pass
Gbil07G0016430.1 Rosmarinic Acid C4H low borderline
Gbil07G0017940.1 Rosmarinic Acid C4H medium pass
Gbil07G0020050.1 Rosmarinic Acid C4H medium pass
Gbil08G0000710.1 Rosmarinic Acid C4H low borderline
Gbil08G0000770.1 Rosmarinic Acid C4H low borderline
Gbil08G0000840.1 Rosmarinic Acid C4H low borderline
Gbil08G0001280.1 Rosmarinic Acid C4H low borderline
Gbil08G0001290.1 Rosmarinic Acid C4H low borderline
Gbil08G0004010.1 Rosmarinic Acid C4H low borderline
Gbil08G0004020.1 Rosmarinic Acid C4H low borderline
Gbil08G0004030.1 Rosmarinic Acid C4H medium pass
Gbil08G0004040.1 Rosmarinic Acid C4H low borderline
Gbil08G0004050.1 Rosmarinic Acid C4H medium pass
Gbil08G0004620.1 Rosmarinic Acid C4H low borderline
Gbil08G0005100.1 Rosmarinic Acid C4H medium pass
Gbil08G0006940.1 Rosmarinic Acid C4H low borderline
Gbil08G0006950.1 Rosmarinic Acid C4H low borderline
Gbil08G0006960.1 Rosmarinic Acid C4H low borderline
Gbil08G0008150.1 Rosmarinic Acid C4H low borderline
Gbil08G0008690.1 Rosmarinic Acid C4H low borderline
Gbil08G0008700.1 Rosmarinic Acid C4H low borderline
Gbil08G0011590.1 Rosmarinic Acid C4H low borderline
Gbil08G0011680.1 Rosmarinic Acid C4H low borderline
Gbil08G0013420.1 Rosmarinic Acid C4H low borderline
Gbil08G0016570.1 Rosmarinic Acid C4H low borderline
Gbil08G0017510.1 Rosmarinic Acid C4H medium pass
Gbil08G0017640.1 Rosmarinic Acid C4H medium pass
Gbil08G0017650.1 Rosmarinic Acid C4H medium pass
Gbil08G0017660.1 Rosmarinic Acid C4H medium pass