PlantSME Plant secondary metabolism enzyme database

Ginkgo biloba (ginkgo_biloba)

Imported from atlas release summary for Ginkgo biloba.

2037
Candidate Protein Records
1873
Pathway-Level Records
4596
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Gymnosperms
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 479 19 BAHD (173) View species results
Alkaloid pathway 426 21 7DLGT (98) View species results
Phenylpropanoid pathway 403 10 POD (161) View species results
Flavonoid pathway 260 10 UFGT (149) View species results
Rosmarinic acid pathway 211 7 C4H (109) View species results
Steroid pathway 94 12 CAS (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1906 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 303 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Gbil08G0017670.1 Rosmarinic Acid C4H medium pass
Gbil08G0018250.1 Rosmarinic Acid C4H medium pass
Gbil08G0018730.1 Rosmarinic Acid C4H low borderline
Gbil08G0019670.1 Rosmarinic Acid C4H low borderline
Gbil09G0008280.1 Rosmarinic Acid C4H low borderline
Gbil09G0008690.1 Rosmarinic Acid C4H low borderline
Gbil09G0011050.1 Rosmarinic Acid C4H low borderline
Gbil09G0012730.1 Rosmarinic Acid C4H low borderline
Gbil09G0013440.1 Rosmarinic Acid C4H medium pass
Gbil09G0013450.1 Rosmarinic Acid C4H medium pass
Gbil09G0013460.1 Rosmarinic Acid C4H medium pass
Gbil09G0014740.1 Rosmarinic Acid C4H low borderline
Gbil09G0016620.1 Rosmarinic Acid C4H low borderline
Gbil09G0021210.1 Rosmarinic Acid C4H medium pass
Gbil10G0000960.1 Rosmarinic Acid C4H low borderline
Gbil10G0001090.1 Rosmarinic Acid C4H low borderline
Gbil10G0001100.1 Rosmarinic Acid C4H low borderline
Gbil10G0004560.1 Rosmarinic Acid C4H medium pass
Gbil10G0004570.1 Rosmarinic Acid C4H medium pass
Gbil10G0004580.1 Rosmarinic Acid C4H medium pass
Gbil10G0004760.1 Rosmarinic Acid C4H low borderline
Gbil10G0004770.1 Rosmarinic Acid C4H low borderline
Gbil10G0006860.1 Rosmarinic Acid C4H low borderline
Gbil10G0009150.1 Rosmarinic Acid C4H low borderline
Gbil10G0010250.1 Rosmarinic Acid C4H low borderline
Gbil10G0016930.1 Rosmarinic Acid C4H low borderline
Gbil10G0016940.1 Rosmarinic Acid C4H low borderline
Gbil10G0016950.1 Rosmarinic Acid C4H medium pass
Gbil10G0016960.1 Rosmarinic Acid C4H low borderline
Gbil10G0017380.1 Rosmarinic Acid C4H low borderline
Gbil10G0019280.1 Rosmarinic Acid C4H low borderline
Gbil10G0020270.1 Rosmarinic Acid C4H low borderline
Gbil11G0000170.1 Rosmarinic Acid C4H low borderline
Gbil11G0001680.1 Rosmarinic Acid C4H medium pass
Gbil11G0001710.1 Rosmarinic Acid C4H low borderline
Gbil11G0001920.1 Rosmarinic Acid C4H low borderline
Gbil11G0001930.1 Rosmarinic Acid C4H low borderline
Gbil11G0001940.1 Rosmarinic Acid C4H low borderline
Gbil11G0002130.1 Rosmarinic Acid C4H low borderline
Gbil11G0002140.1 Rosmarinic Acid C4H low borderline
Gbil11G0002150.1 Rosmarinic Acid C4H low borderline
Gbil11G0002200.1 Rosmarinic Acid C4H low borderline
Gbil11G0005360.1 Rosmarinic Acid C4H low borderline
Gbil11G0005370.1 Rosmarinic Acid C4H low borderline
Gbil11G0005810.1 Rosmarinic Acid C4H medium pass
Gbil12G0001530.1 Rosmarinic Acid C4H low borderline
Gbil12G0006560.1 Rosmarinic Acid C4H low borderline
Gbil12G0006590.1 Rosmarinic Acid C4H low borderline
Gbil12G0007150.1 Rosmarinic Acid C4H low borderline
Gbil12G0007160.1 Rosmarinic Acid C4H medium pass