PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

3434
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Grai03G0010720.1 Steroid BR6OX2/CYP85A2 low borderline
Grai03G0010720.2 Steroid BR6OX2/CYP85A2 low borderline
Grai03G0012390.1 Steroid BR6OX2/CYP85A2 low borderline
Grai03G0016570.1 Steroid BR6OX2/CYP85A2 medium borderline
Grai04G0011130.1 Steroid BR6OX2/CYP85A2 low borderline
Grai04G0012970.1 Steroid BR6OX2/CYP85A2 low borderline
Grai04G0014990.1 Steroid BR6OX2/CYP85A2 low borderline
Grai04G0014990.2 Steroid BR6OX2/CYP85A2 low borderline
Grai04G0014990.3 Steroid BR6OX2/CYP85A2 low borderline
Grai04G0015900.1 Steroid BR6OX2/CYP85A2 low borderline
Grai04G0020200.1 Steroid BR6OX2/CYP85A2 low borderline
Grai04G0021330.1 Steroid BR6OX2/CYP85A2 low borderline
Grai04G0021950.1 Steroid BR6OX2/CYP85A2 low borderline
Grai04G0025530.1 Steroid BR6OX2/CYP85A2 medium borderline
Grai04G0027070.1 Steroid BR6OX2/CYP85A2 low borderline
Grai05G0003260.1 Steroid BR6OX2/CYP85A2 low borderline
Grai05G0003280.1 Steroid BR6OX2/CYP85A2 low borderline
Grai05G0003290.1 Steroid BR6OX2/CYP85A2 low borderline
Grai05G0003320.1 Steroid BR6OX2/CYP85A2 low borderline
Grai05G0003330.1 Steroid BR6OX2/CYP85A2 low borderline
Grai05G0003370.1 Steroid BR6OX2/CYP85A2 low borderline
Grai05G0010040.1 Steroid BR6OX2/CYP85A2 low borderline
Grai05G0014600.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0003250.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0003260.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0006180.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0006210.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0006220.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0008180.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0011100.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0014050.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0014060.1 Steroid BR6OX2/CYP85A2 low borderline
Grai06G0021700.1 Steroid BR6OX2/CYP85A2 low borderline
Grai07G0000870.1 Steroid BR6OX2/CYP85A2 low borderline
Grai07G0010030.1 Steroid BR6OX2/CYP85A2 low borderline
Grai07G0011130.1 Steroid BR6OX2/CYP85A2 low borderline
Grai07G0023660.1 Steroid BR6OX2/CYP85A2 low borderline
Grai08G0009870.1 Steroid BR6OX2/CYP85A2 low borderline
Grai08G0012580.1 Steroid BR6OX2/CYP85A2 low borderline
Grai08G0012760.1 Steroid BR6OX2/CYP85A2 low borderline
Grai08G0015490.1 Steroid BR6OX2/CYP85A2 low borderline
Grai08G0015490.2 Steroid BR6OX2/CYP85A2 low borderline
Grai08G0017640.1 Steroid BR6OX2/CYP85A2 low borderline
Grai08G0022260.1 Steroid BR6OX2/CYP85A2 low borderline
Grai08G0024760.1 Steroid BR6OX2/CYP85A2 low borderline
Grai08G0025870.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0009290.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0010120.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0019630.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0020660.1 Steroid BR6OX2/CYP85A2 low borderline