PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

3434
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Grai09G0020670.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0021700.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0027490.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0029390.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0033160.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0035880.1 Steroid BR6OX2/CYP85A2 low borderline
Grai09G0042490.1 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0001470.1 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0001500.1 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0001530.1 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0006580.1 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0006580.2 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0008870.1 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0017890.1 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0021550.1 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0021550.2 Steroid BR6OX2/CYP85A2 low borderline
Grai10G0021550.4 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0015740.1 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0020700.1 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0020950.1 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0022510.1 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0022520.1 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0022980.1 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0023110.1 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0027290.1 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0027300.1 Steroid BR6OX2/CYP85A2 low borderline
Grai11G0027310.1 Steroid BR6OX2/CYP85A2 low borderline
Grai12G0013370.1 Steroid BR6OX2/CYP85A2 low borderline
Grai12G0017560.1 Steroid BR6OX2/CYP85A2 low borderline
Grai13G0000090.1 Steroid BR6OX2/CYP85A2 low borderline
Grai13G0000090.2 Steroid BR6OX2/CYP85A2 low borderline
Grai13G0004130.1 Steroid BR6OX2/CYP85A2 low borderline
Grai13G0006990.1 Steroid BR6OX2/CYP85A2 low borderline
Grai13G0009500.1 Steroid BR6OX2/CYP85A2 low borderline
Grai13G0015430.1 Steroid BR6OX2/CYP85A2 low borderline
Grai13G0015430.2 Steroid BR6OX2/CYP85A2 low borderline
Grai13G0018170.1 Steroid BR6OX2/CYP85A2 low borderline
Grai13G0027170.1 Steroid BR6OX2/CYP85A2 low borderline
Grai01G0006510.1 Steroid CAS medium pass
Grai01G0006510.2 Steroid CAS medium pass
Grai01G0006510.3 Steroid CAS medium pass
Grai01G0006510.4 Steroid CAS medium pass
Grai02G0010650.1 Steroid CAS low borderline
Grai02G0011060.1 Steroid CAS medium pass
Grai02G0011060.2 Steroid CAS medium pass
Grai02G0011060.3 Steroid CAS medium pass
Grai02G0023460.1 Steroid CAS medium pass
Grai02G0023460.2 Steroid CAS medium pass
Grai02G0023460.3 Steroid CAS medium pass
Grai02G0023460.4 Steroid CAS medium pass