PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

3434
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Grai01G0021380.1 Rosmarinic Acid C4H low borderline
Grai01G0021380.2 Rosmarinic Acid C4H low borderline
Grai01G0021730.1 Rosmarinic Acid C4H low borderline
Grai01G0022270.1 Rosmarinic Acid C4H low borderline
Grai01G0022280.1 Rosmarinic Acid C4H low borderline
Grai01G0023940.1 Rosmarinic Acid C4H medium pass
Grai01G0023960.1 Rosmarinic Acid C4H low borderline
Grai02G0004320.1 Rosmarinic Acid C4H low borderline
Grai02G0004320.2 Rosmarinic Acid C4H low borderline
Grai02G0004340.1 Rosmarinic Acid C4H low borderline
Grai02G0004360.1 Rosmarinic Acid C4H low borderline
Grai02G0004360.2 Rosmarinic Acid C4H low borderline
Grai02G0007190.1 Rosmarinic Acid C4H medium pass
Grai02G0007200.1 Rosmarinic Acid C4H medium pass
Grai02G0008790.1 Rosmarinic Acid C4H low borderline
Grai02G0009710.1 Rosmarinic Acid C4H low borderline
Grai02G0009730.1 Rosmarinic Acid C4H low borderline
Grai02G0009740.1 Rosmarinic Acid C4H medium pass
Grai02G0009750.1 Rosmarinic Acid C4H low borderline
Grai02G0009770.1 Rosmarinic Acid C4H low borderline
Grai02G0009780.1 Rosmarinic Acid C4H low borderline
Grai02G0009790.1 Rosmarinic Acid C4H medium pass
Grai02G0009790.2 Rosmarinic Acid C4H medium pass
Grai02G0009800.1 Rosmarinic Acid C4H low borderline
Grai02G0009810.1 Rosmarinic Acid C4H low borderline
Grai02G0009810.2 Rosmarinic Acid C4H low borderline
Grai02G0009810.3 Rosmarinic Acid C4H medium pass
Grai02G0009830.1 Rosmarinic Acid C4H low borderline
Grai02G0013020.1 Rosmarinic Acid C4H low borderline
Grai02G0018400.1 Rosmarinic Acid C4H low borderline
Grai02G0022860.1 Rosmarinic Acid C4H low borderline
Grai02G0022870.1 Rosmarinic Acid C4H medium pass
Grai02G0022880.1 Rosmarinic Acid C4H low borderline
Grai02G0023090.1 Rosmarinic Acid C4H medium pass
Grai03G0001210.1 Rosmarinic Acid C4H low borderline
Grai03G0001210.2 Rosmarinic Acid C4H low borderline
Grai03G0001210.3 Rosmarinic Acid C4H low borderline
Grai03G0001210.4 Rosmarinic Acid C4H low borderline
Grai03G0001210.5 Rosmarinic Acid C4H low borderline
Grai03G0002360.1 Rosmarinic Acid C4H low borderline
Grai03G0002390.1 Rosmarinic Acid C4H low borderline
Grai03G0002440.1 Rosmarinic Acid C4H low borderline
Grai03G0002450.1 Rosmarinic Acid C4H medium pass
Grai03G0002750.1 Rosmarinic Acid C4H medium pass
Grai03G0004730.1 Rosmarinic Acid C4H low borderline
Grai03G0005170.1 Rosmarinic Acid C4H low borderline
Grai03G0005860.1 Rosmarinic Acid C4H low borderline
Grai03G0007700.1 Rosmarinic Acid C4H low borderline
Grai03G0010720.1 Rosmarinic Acid C4H low borderline
Grai03G0010720.2 Rosmarinic Acid C4H low borderline