PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

3434
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Grai03G0010740.1 Rosmarinic Acid C4H low borderline
Grai03G0012990.1 Rosmarinic Acid C4H low borderline
Grai03G0016500.1 Rosmarinic Acid C4H low borderline
Grai03G0016510.1 Rosmarinic Acid C4H low borderline
Grai03G0016530.1 Rosmarinic Acid C4H low borderline
Grai03G0016540.1 Rosmarinic Acid C4H low borderline
Grai03G0016550.1 Rosmarinic Acid C4H low borderline
Grai03G0016550.2 Rosmarinic Acid C4H low borderline
Grai03G0016560.1 Rosmarinic Acid C4H medium pass
Grai03G0016570.1 Rosmarinic Acid C4H medium pass
Grai03G0016570.2 Rosmarinic Acid C4H low borderline
Grai03G0016580.1 Rosmarinic Acid C4H low borderline
Grai03G0016610.1 Rosmarinic Acid C4H low borderline
Grai04G0002080.1 Rosmarinic Acid C4H low borderline
Grai04G0009570.1 Rosmarinic Acid C4H low borderline
Grai04G0012970.1 Rosmarinic Acid C4H low borderline
Grai04G0014990.1 Rosmarinic Acid C4H low borderline
Grai04G0014990.2 Rosmarinic Acid C4H low borderline
Grai04G0014990.3 Rosmarinic Acid C4H low borderline
Grai04G0015540.1 Rosmarinic Acid C4H low borderline
Grai04G0015540.2 Rosmarinic Acid C4H low borderline
Grai04G0017720.1 Rosmarinic Acid C4H low borderline
Grai04G0017720.3 Rosmarinic Acid C4H low borderline
Grai04G0018720.1 Rosmarinic Acid C4H low borderline
Grai04G0018730.1 Rosmarinic Acid C4H low borderline
Grai04G0018730.2 Rosmarinic Acid C4H low borderline
Grai04G0018730.3 Rosmarinic Acid C4H low borderline
Grai04G0018730.4 Rosmarinic Acid C4H low borderline
Grai04G0020200.1 Rosmarinic Acid C4H medium pass
Grai04G0020470.1 Rosmarinic Acid C4H low borderline
Grai04G0020480.1 Rosmarinic Acid C4H medium pass
Grai04G0020490.1 Rosmarinic Acid C4H medium pass
Grai04G0020500.1 Rosmarinic Acid C4H low borderline
Grai04G0020540.1 Rosmarinic Acid C4H low borderline
Grai04G0025530.1 Rosmarinic Acid C4H low borderline
Grai04G0027070.1 Rosmarinic Acid C4H low borderline
Grai04G0027820.1 Rosmarinic Acid C4H low borderline
Grai05G0000590.1 Rosmarinic Acid C4H medium pass
Grai05G0003260.1 Rosmarinic Acid C4H low borderline
Grai05G0003280.1 Rosmarinic Acid C4H low borderline
Grai05G0003290.1 Rosmarinic Acid C4H low borderline
Grai05G0003310.1 Rosmarinic Acid C4H low borderline
Grai05G0003320.1 Rosmarinic Acid C4H low borderline
Grai05G0003330.1 Rosmarinic Acid C4H low borderline
Grai05G0003340.1 Rosmarinic Acid C4H low borderline
Grai05G0003350.1 Rosmarinic Acid C4H low borderline
Grai05G0003360.1 Rosmarinic Acid C4H low borderline
Grai05G0003370.1 Rosmarinic Acid C4H low borderline
Grai05G0007950.1 Rosmarinic Acid C4H low borderline
Grai05G0007980.1 Rosmarinic Acid C4H low borderline