PlantSME Plant secondary metabolism enzyme database

Gossypium raimondii (gossypium_raimondii)

Imported from atlas release summary for Gossypium raimondii.

4361
Candidate Protein Records
3434
Pathway-Level Records
8102
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 968 21 BAHD (459) View species results
Phenylpropanoid pathway 784 11 POD (333) View species results
Alkaloid pathway 770 23 NMT (140) View species results
Flavonoid pathway 341 12 UFGT (176) View species results
Steroid pathway 315 13 CAS (138) View species results
Rosmarinic acid pathway 256 7 C4H (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2559 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 723 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Grai05G0010040.1 Rosmarinic Acid C4H medium pass
Grai05G0010070.1 Rosmarinic Acid C4H low borderline
Grai05G0010070.2 Rosmarinic Acid C4H low borderline
Grai05G0014600.1 Rosmarinic Acid C4H low borderline
Grai05G0017600.1 Rosmarinic Acid C4H low borderline
Grai05G0017610.1 Rosmarinic Acid C4H low borderline
Grai06G0006180.1 Rosmarinic Acid C4H medium pass
Grai06G0006200.1 Rosmarinic Acid C4H low borderline
Grai06G0006210.1 Rosmarinic Acid C4H medium pass
Grai06G0006220.1 Rosmarinic Acid C4H medium pass
Grai06G0008180.1 Rosmarinic Acid C4H low borderline
Grai06G0011100.1 Rosmarinic Acid C4H low borderline
Grai06G0014040.1 Rosmarinic Acid C4H medium pass
Grai06G0014050.1 Rosmarinic Acid C4H low borderline
Grai06G0014060.1 Rosmarinic Acid C4H low borderline
Grai06G0014070.1 Rosmarinic Acid C4H medium pass
Grai06G0014070.2 Rosmarinic Acid C4H medium pass
Grai06G0019820.1 Rosmarinic Acid C4H low borderline
Grai06G0021100.1 Rosmarinic Acid C4H medium pass
Grai06G0021110.1 Rosmarinic Acid C4H low borderline
Grai06G0021120.1 Rosmarinic Acid C4H low borderline
Grai06G0021620.1 Rosmarinic Acid C4H low borderline
Grai06G0021700.1 Rosmarinic Acid C4H low borderline
Grai06G0022430.1 Rosmarinic Acid C4H medium pass
Grai06G0022440.1 Rosmarinic Acid C4H medium pass
Grai06G0022440.2 Rosmarinic Acid C4H medium pass
Grai07G0000850.1 Rosmarinic Acid C4H low borderline
Grai07G0000870.1 Rosmarinic Acid C4H medium pass
Grai07G0004140.1 Rosmarinic Acid C4H low borderline
Grai07G0004960.1 Rosmarinic Acid C4H medium pass
Grai07G0009250.1 Rosmarinic Acid C4H low borderline
Grai07G0009250.2 Rosmarinic Acid C4H low borderline
Grai07G0009250.3 Rosmarinic Acid C4H low borderline
Grai07G0009260.1 Rosmarinic Acid C4H low borderline
Grai07G0009270.1 Rosmarinic Acid C4H low borderline
Grai07G0009270.2 Rosmarinic Acid C4H low borderline
Grai07G0009270.3 Rosmarinic Acid C4H low borderline
Grai07G0011130.1 Rosmarinic Acid C4H low borderline
Grai07G0015120.1 Rosmarinic Acid C4H medium pass
Grai07G0015680.1 Rosmarinic Acid C4H low borderline
Grai07G0016390.1 Rosmarinic Acid C4H low borderline
Grai07G0018110.1 Rosmarinic Acid C4H low borderline
Grai07G0019770.1 Rosmarinic Acid C4H medium pass
Grai07G0019910.1 Rosmarinic Acid C4H low borderline
Grai07G0020370.1 Rosmarinic Acid C4H low borderline
Grai07G0020370.2 Rosmarinic Acid C4H low borderline
Grai07G0020870.1 Rosmarinic Acid C4H low borderline
Grai07G0020880.1 Rosmarinic Acid C4H low borderline
Grai07G0021910.1 Rosmarinic Acid C4H medium pass
Grai07G0021920.1 Rosmarinic Acid C4H low borderline