Homaliodendron scalpellifolium (homaliodendron_scalpellifolium)
Imported from atlas release summary for Homaliodendron scalpellifolium.
784
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
784
Candidate Genes
C4H
7.04%
C3'H/CYP98A
5.68%
BAHD
5.39%
POD
5.0%
4CL
4.8%
CYP76
4.61%
PAL
3.78%
NMT
3.4%
Other Families
60.31%
More Families (97)
IFS
67
3.25%
DWF4/CYP90B1
55
2.67%
F3'H/CYP75B
47
2.28%
BR6OX2/CYP85A2
47
2.28%
T3O
44
2.13%
F3H
44
2.13%
STR
43
2.09%
IFR
41
1.99%
UGT
38
1.84%
7DLGT
33
1.6%
GS
33
1.6%
PYKS
30
1.46%
UFGT
30
1.46%
CAD
30
1.46%
COMT
28
1.36%
IO
27
1.31%
CODM/T6ODM
26
1.26%
G8O/G8H
21
1.02%
TRI/TRII
21
1.02%
CHS
20
0.97%
SMT1/SMT2/SMT3
20
0.97%
CYP71
19
0.92%
7DLH
18
0.87%
H6H
18
0.87%
CAS
18
0.87%
F3'5'H/CYP75A
17
0.82%
CYP90D1
17
0.82%
LAMT
16
0.78%
SLS
16
0.78%
16OMT
16
0.78%
CSE
16
0.78%
T16H
15
0.73%
NCS
13
0.63%
FNS
13
0.63%
ANR
13
0.63%
SGD
11
0.53%
HCT
11
0.53%
RAS
11
0.53%
BBE
10
0.49%
CYP80B1
10
0.49%
8HGO
9
0.44%
CNMT
9
0.44%
LAC
9
0.44%
SQS/FDFT1
9
0.44%
COR
8
0.39%
GES
8
0.39%
DWF5
8
0.39%
AACT
8
0.39%
TPS
8
0.39%
GGPPS
7
0.34%
PMT
6
0.29%
TDC
6
0.29%
CPD/CYP90A1
6
0.29%
MPO
5
0.24%
CHI
5
0.24%
DFR
5
0.24%
CCR
5
0.24%
TAT
5
0.24%
ROT3/CYP90C1
5
0.24%
TYDC_DDC
4
0.19%
CYP719
4
0.19%
F5H/CYP84A
4
0.19%
CPR
4
0.19%
BR6OX1/CYP85A1
4
0.19%
MVK
4
0.19%
DXS
4
0.19%
HDR/IspH
4
0.19%
6OMT_4OMT_SOMT
3
0.15%
ISY
3
0.15%
CYP80F1
3
0.15%
FLS
3
0.15%
SMO1/SMO2
3
0.15%
CYP51G1
3
0.15%
SQE
3
0.15%
IDI
3
0.15%
HDS/IspG
3
0.15%
MVD
3
0.15%
ADC
2
0.1%
FK
2
0.1%
DET2
2
0.1%
CMK/IspE
2
0.1%
DXR
2
0.1%
MCT/IspD
2
0.1%
FPPS
2
0.1%
XMT_MXMT_DXMT
1
0.05%
ODC
1
0.05%
ANS/LDOX
1
0.05%
CCoAOMT
1
0.05%
HPPR
1
0.05%
HYD1
1
0.05%
CPI1
1
0.05%
DWF7
1
0.05%
DWF1
1
0.05%
MDS/IspF
1
0.05%
HMGS
1
0.05%
HMGR
1
0.05%
PMK
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 211 | 11 | POD (97) | View species results |
| Terpenoid pathway | 187 | 19 | BAHD (73) | View species results |
| Alkaloid pathway | 142 | 20 | NMT (33) | View species results |
| Flavonoid pathway | 105 | 10 | UFGT (27) | View species results |
| Rosmarinic acid pathway | 91 | 7 | C4H (33) | View species results |
| Steroid pathway | 48 | 12 | CAS (16) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 806 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 133 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Hsca1038870002620 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Hsca1250014250 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca1383410027620 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca1445590034280 | Flavonoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Hsca1451040035440 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca1479880040700 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hsca1553360057020 | Flavonoid | 4CL | low | borderline | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| Hsca1565180063230 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca1600350075950 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hsca1635020117630 | Flavonoid | 4CL | low | borderline | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Hsca1638170124520 | Flavonoid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| Hsca1640950129970 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Hsca1641400131640 | Flavonoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hsca1643000136350 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Hsca1647560148260 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Hsca1649450154410 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Hsca1650620159120 | Flavonoid | 4CL | low | borderline | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Hsca1651600162210 | Flavonoid | 4CL | low | borderline | 4CL__00007__sp_Q42524_4CL1_ARATH |
| Hsca1651650163140 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hsca1652470166050 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca1661690203950 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Hsca1662460207250 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Hsca1667070229590 | Flavonoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Hsca1949210246870 | Flavonoid | 4CL | low | borderline | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| Hsca1949220246930 | Flavonoid | 4CL | low | borderline | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| Hsca1956660249490 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Hsca1956670249530 | Flavonoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Hsca340274340 | Flavonoid | 4CL | medium | pass | 4CL__00004__sp_O24146_4CL2_TOBAC |
| Hsca3720279400 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hsca670291580 | Flavonoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Hsca840295470 | Flavonoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Hsca942490299200 | Flavonoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca964900299760 | Flavonoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hsca1038870002620 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Hsca1250014250 | Phenylpropanoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca1383410027620 | Phenylpropanoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca1445590034280 | Phenylpropanoid | 4CL | low | borderline | 4CL__00010__sp_Q6ETN3_4CL3_ORYSJ |
| Hsca1451040035440 | Phenylpropanoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca1479880040700 | Phenylpropanoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hsca1553360057020 | Phenylpropanoid | 4CL | low | borderline | 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ |
| Hsca1565180063230 | Phenylpropanoid | 4CL | medium | pass | 4CL__00016__sp_Q9M0X9_4CLL7_ARATH |
| Hsca1600350075950 | Phenylpropanoid | 4CL | medium | pass | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hsca1635020117630 | Phenylpropanoid | 4CL | low | borderline | 4CL__00013__sp_Q84P23_4CLL9_ARATH |
| Hsca1638170124520 | Phenylpropanoid | 4CL | medium | pass | 4CL__00002__sp_I3PB37_4CL1_PETHY |
| Hsca1640950129970 | Phenylpropanoid | 4CL | medium | pass | 4CL__00019__sp_Q9SMT7_4CLLA_ARATH |
| Hsca1641400131640 | Phenylpropanoid | 4CL | low | borderline | 4CL__00012__sp_Q84P21_4CLL5_ARATH |
| Hsca1643000136350 | Phenylpropanoid | 4CL | medium | pass | 4CL__00001__sp_I3PB36_CNL_PETHY |
| Hsca1647560148260 | Phenylpropanoid | 4CL | low | borderline | 4CL__00014__sp_Q84P24_4CLL6_ARATH |
| Hsca1649450154410 | Phenylpropanoid | 4CL | low | borderline | 4CL__00005__sp_P0C5B6_4CLL4_ARATH |
| Hsca1650620159120 | Phenylpropanoid | 4CL | low | borderline | 4CL__00004__sp_O24146_4CL2_TOBAC |