PlantSME Plant secondary metabolism enzyme database

Homaliodendron scalpellifolium (homaliodendron_scalpellifolium)

Imported from atlas release summary for Homaliodendron scalpellifolium.

784
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 211 11 POD (97) View species results
Terpenoid pathway 187 19 BAHD (73) View species results
Alkaloid pathway 142 20 NMT (33) View species results
Flavonoid pathway 105 10 UFGT (27) View species results
Rosmarinic acid pathway 91 7 C4H (33) View species results
Steroid pathway 48 12 CAS (16) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 806 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 133 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Hsca1120250005190 Flavonoid F3H medium borderline
Hsca1266180016670 Flavonoid F3H medium borderline
Hsca1340021280 Flavonoid F3H medium borderline
Hsca1390480028850 Flavonoid F3H low borderline
Hsca1461480038660 Flavonoid F3H medium borderline
Hsca1479150040530 Flavonoid F3H medium pass
Hsca1488550045400 Flavonoid F3H low borderline
Hsca1488940045690 Flavonoid F3H low borderline
Hsca1496020047240 Flavonoid F3H medium borderline
Hsca1546700054810 Flavonoid F3H low borderline
Hsca1548820056160 Flavonoid F3H medium borderline
Hsca1556910058340 Flavonoid F3H medium pass
Hsca1560850060660 Flavonoid F3H medium borderline
Hsca1608720081600 Flavonoid F3H low borderline
Hsca1611520084060 Flavonoid F3H medium pass
Hsca1613770085720 Flavonoid F3H medium borderline
Hsca1620410093130 Flavonoid F3H low borderline
Hsca1620720093790 Flavonoid F3H low borderline
Hsca1622680096000 Flavonoid F3H medium borderline
Hsca1628710104320 Flavonoid F3H low borderline
Hsca1630660109040 Flavonoid F3H medium borderline
Hsca1632010111400 Flavonoid F3H low borderline
Hsca1633640114240 Flavonoid F3H medium borderline
Hsca1640210128280 Flavonoid F3H medium pass
Hsca1650940160080 Flavonoid F3H low borderline
Hsca1651200161180 Flavonoid F3H medium borderline
Hsca1656760181370 Flavonoid F3H medium borderline
Hsca1658230186890 Flavonoid F3H medium borderline
Hsca1658570189050 Flavonoid F3H medium borderline
Hsca1659240192190 Flavonoid F3H medium borderline
Hsca1660810199910 Flavonoid F3H medium borderline
Hsca1661490203050 Flavonoid F3H medium pass
Hsca1663080210250 Flavonoid F3H medium borderline
Hsca1667240230280 Flavonoid F3H medium borderline
Hsca1965100253160 Flavonoid F3H medium borderline
Hsca1965110253200 Flavonoid F3H medium borderline
Hsca1970254430 Flavonoid F3H medium borderline
Hsca2040255540 Flavonoid F3H medium borderline
Hsca2590263240 Flavonoid F3H medium borderline
Hsca2750265340 Flavonoid F3H medium borderline
Hsca2780265600 Flavonoid F3H medium borderline
Hsca3310273040 Flavonoid F3H medium borderline
Hsca4490288500 Flavonoid F3H medium borderline
Hsca4490288520 Flavonoid F3H medium borderline