Homaliodendron scalpellifolium (homaliodendron_scalpellifolium)
Imported from atlas release summary for Homaliodendron scalpellifolium.
784
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
784
Candidate Genes
C4H
7.04%
C3'H/CYP98A
5.68%
BAHD
5.39%
POD
5.0%
4CL
4.8%
CYP76
4.61%
PAL
3.78%
NMT
3.4%
Other Families
60.31%
More Families (97)
IFS
67
3.25%
DWF4/CYP90B1
55
2.67%
F3'H/CYP75B
47
2.28%
BR6OX2/CYP85A2
47
2.28%
T3O
44
2.13%
F3H
44
2.13%
STR
43
2.09%
IFR
41
1.99%
UGT
38
1.84%
7DLGT
33
1.6%
GS
33
1.6%
PYKS
30
1.46%
UFGT
30
1.46%
CAD
30
1.46%
COMT
28
1.36%
IO
27
1.31%
CODM/T6ODM
26
1.26%
G8O/G8H
21
1.02%
TRI/TRII
21
1.02%
CHS
20
0.97%
SMT1/SMT2/SMT3
20
0.97%
CYP71
19
0.92%
7DLH
18
0.87%
H6H
18
0.87%
CAS
18
0.87%
F3'5'H/CYP75A
17
0.82%
CYP90D1
17
0.82%
LAMT
16
0.78%
SLS
16
0.78%
16OMT
16
0.78%
CSE
16
0.78%
T16H
15
0.73%
NCS
13
0.63%
FNS
13
0.63%
ANR
13
0.63%
SGD
11
0.53%
HCT
11
0.53%
RAS
11
0.53%
BBE
10
0.49%
CYP80B1
10
0.49%
8HGO
9
0.44%
CNMT
9
0.44%
LAC
9
0.44%
SQS/FDFT1
9
0.44%
COR
8
0.39%
GES
8
0.39%
DWF5
8
0.39%
AACT
8
0.39%
TPS
8
0.39%
GGPPS
7
0.34%
PMT
6
0.29%
TDC
6
0.29%
CPD/CYP90A1
6
0.29%
MPO
5
0.24%
CHI
5
0.24%
DFR
5
0.24%
CCR
5
0.24%
TAT
5
0.24%
ROT3/CYP90C1
5
0.24%
TYDC_DDC
4
0.19%
CYP719
4
0.19%
F5H/CYP84A
4
0.19%
CPR
4
0.19%
BR6OX1/CYP85A1
4
0.19%
MVK
4
0.19%
DXS
4
0.19%
HDR/IspH
4
0.19%
6OMT_4OMT_SOMT
3
0.15%
ISY
3
0.15%
CYP80F1
3
0.15%
FLS
3
0.15%
SMO1/SMO2
3
0.15%
CYP51G1
3
0.15%
SQE
3
0.15%
IDI
3
0.15%
HDS/IspG
3
0.15%
MVD
3
0.15%
ADC
2
0.1%
FK
2
0.1%
DET2
2
0.1%
CMK/IspE
2
0.1%
DXR
2
0.1%
MCT/IspD
2
0.1%
FPPS
2
0.1%
XMT_MXMT_DXMT
1
0.05%
ODC
1
0.05%
ANS/LDOX
1
0.05%
CCoAOMT
1
0.05%
HPPR
1
0.05%
HYD1
1
0.05%
CPI1
1
0.05%
DWF7
1
0.05%
DWF1
1
0.05%
MDS/IspF
1
0.05%
HMGS
1
0.05%
HMGR
1
0.05%
PMK
1
0.05%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Phenylpropanoid pathway | 211 | 11 | POD (97) | View species results |
| Terpenoid pathway | 187 | 19 | BAHD (73) | View species results |
| Alkaloid pathway | 142 | 20 | NMT (33) | View species results |
| Flavonoid pathway | 105 | 10 | UFGT (27) | View species results |
| Rosmarinic acid pathway | 91 | 7 | C4H (33) | View species results |
| Steroid pathway | 48 | 12 | CAS (16) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 806 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 133 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Hsca1003090000320 | Phenylpropanoid | POD | medium | pass | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| Hsca1110003910 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Hsca1133180006070 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Hsca1138240007020 | Phenylpropanoid | POD | medium | pass | POD__00008__sp_P52574_REHY_SYNRU |
| Hsca1330021170 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Hsca1340021550 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Hsca1358310023890 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| Hsca1368100025010 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Hsca1377450026460 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Hsca1383620027670 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| Hsca1453860036160 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| Hsca1485250043270 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Hsca1487080044160 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Hsca1487550044540 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| Hsca1528690050490 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| Hsca1550056490 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Hsca1550056520 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Hsca1550420056600 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Hsca1552960056870 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Hsca1563100062100 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Hsca1563980062830 | Phenylpropanoid | POD | low | borderline | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Hsca1568370063820 | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Hsca1580580066440 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Hsca1586260068530 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Hsca1586930068690 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Hsca1590330070970 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Hsca1590510071150 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Hsca1591830072260 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Hsca1593110073660 | Phenylpropanoid | POD | medium | pass | POD__00003__sp_A9PCL4_PRX2_POPTR |
| Hsca1606230080110 | Phenylpropanoid | POD | medium | pass | POD__00015__sp_Q69SV0_APX8_ORYSJ |
| Hsca1610200082720 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| Hsca1614590086200 | Phenylpropanoid | POD | low | borderline | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Hsca1620010092540 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Hsca1622570095860 | Phenylpropanoid | POD | medium | pass | POD__00017__sp_Q75SY5_PRXQ_GENTR |
| Hsca1623220096860 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Hsca1623250096890 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Hsca1628750104480 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Hsca1629980107060 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Hsca1630120107540 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| Hsca1630980109280 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Hsca1631780110910 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| Hsca1632130111610 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| Hsca1632130111650 | Phenylpropanoid | POD | medium | pass | POD__00003__sp_A9PCL4_PRX2_POPTR |
| Hsca1634450116290 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Hsca1635830119050 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Hsca1639710127300 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| Hsca1644330139410 | Phenylpropanoid | POD | low | borderline | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Hsca1644530139770 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| Hsca1644720140560 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Hsca1646270144650 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |