PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BR6OX2/CYP85A2
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Gene Pathway Family Confidence Status
LONjap04G0018690.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0027290.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0027380.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0031700.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0031720.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap04G0033650.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap05G0008480.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap05G0029400.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap05G0029530.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap05G0029580.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap05G0029590.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap05G0030390.1 Steroid BR6OX2/CYP85A2 medium pass
LONjap05G0030410.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap06G0002580.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap06G0010060.1 Steroid BR6OX2/CYP85A2 medium borderline
LONjap06G0011640.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap06G0023830.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap06G0026440.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap06G0027130.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap07G0011270.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap07G0016630.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap07G0017370.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap07G0024240.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap08G0000880.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap08G0000890.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap08G0018640.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap08G0027360.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap09G0014100.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap09G0014430.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap09G0014790.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap09G0024230.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap09G0024250.1 Steroid BR6OX2/CYP85A2 low borderline
LONjap09G0028050.1 Steroid BR6OX2/CYP85A2 low borderline
LONjapGWHAAZE000000150000290.1 Steroid BR6OX2/CYP85A2 low borderline
LONjapGWHAAZE000000210002250.1 Steroid BR6OX2/CYP85A2 low borderline
LONjapGWHAAZE000000360004390.1 Steroid BR6OX2/CYP85A2 low borderline
LONjapGWHAAZE000000360004400.1 Steroid BR6OX2/CYP85A2 low borderline