PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
LONjap01G0005650.1 Alkaloid T16H medium borderline
LONjap01G0005700.1 Alkaloid T16H medium borderline
LONjap01G0005880.1 Alkaloid T16H medium borderline
LONjap01G0024870.1 Alkaloid T16H medium borderline
LONjap02G0001450.1 Alkaloid T16H medium borderline
LONjap02G0012390.1 Alkaloid T16H low borderline
LONjap02G0025270.1 Alkaloid T16H medium borderline
LONjap02G0029440.1 Alkaloid T16H medium borderline
LONjap02G0036410.1 Alkaloid T16H low borderline
LONjap02G0044770.1 Alkaloid T16H medium borderline
LONjap02G0046000.1 Alkaloid T16H medium borderline
LONjap03G0008970.1 Alkaloid T16H medium borderline
LONjap03G0009410.1 Alkaloid T16H medium borderline
LONjap03G0012490.1 Alkaloid T16H medium borderline
LONjap03G0023810.1 Alkaloid T16H medium borderline
LONjap04G0002620.1 Alkaloid T16H low borderline
LONjap04G0002640.1 Alkaloid T16H medium pass
LONjap04G0003300.1 Alkaloid T16H medium borderline
LONjap04G0003310.1 Alkaloid T16H medium borderline
LONjap04G0008160.1 Alkaloid T16H medium borderline
LONjap05G0022310.1 Alkaloid T16H medium borderline
LONjap05G0022430.1 Alkaloid T16H medium pass
LONjap05G0028990.1 Alkaloid T16H medium borderline
LONjap05G0029390.1 Alkaloid T16H low borderline
LONjap05G0029400.1 Alkaloid T16H medium borderline
LONjap05G0029460.1 Alkaloid T16H medium borderline
LONjap06G0026650.1 Alkaloid T16H medium borderline
LONjap07G0016700.1 Alkaloid T16H medium borderline
LONjap08G0000910.1 Alkaloid T16H medium borderline
LONjap08G0004590.1 Alkaloid T16H medium pass
LONjap08G0004600.1 Alkaloid T16H medium borderline
LONjap09G0002270.1 Alkaloid T16H medium borderline
LONjap09G0002350.1 Alkaloid T16H medium borderline
LONjap09G0014100.1 Alkaloid T16H medium borderline
LONjap09G0014140.1 Alkaloid T16H medium borderline
LONjap09G0014940.1 Alkaloid T16H medium borderline
LONjap09G0021250.1 Alkaloid T16H medium borderline
LONjapGWHAAZE000000210002230.1 Alkaloid T16H medium borderline
LONjapGWHAAZE000000210002240.1 Alkaloid T16H medium borderline
LONjapGWHAAZE000000280003720.1 Alkaloid T16H low borderline
LONjapGWHAAZE000001200014600.1 Alkaloid T16H medium borderline
LONjapGWHAAZE000001350015300.1 Alkaloid T16H low borderline