PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CODM/T6ODM
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Gene Pathway Family Confidence Status
LONjap01G0006590.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016040.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016050.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016080.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016150.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016160.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016180.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0024090.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0025600.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0025630.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0025640.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0027980.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0033010.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0034810.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0043060.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0044740.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0044950.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0044960.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0044970.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0044980.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0044990.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0045000.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0047910.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0048770.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0001310.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0005470.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0007410.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0008350.1 Alkaloid CODM/T6ODM low borderline
LONjap02G0008440.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0009020.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0009030.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0011970.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0029860.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0029880.1 Alkaloid CODM/T6ODM medium borderline
LONjap02G0034650.1 Alkaloid CODM/T6ODM medium borderline
LONjap03G0018530.1 Alkaloid CODM/T6ODM medium borderline
LONjap03G0018540.1 Alkaloid CODM/T6ODM medium borderline
LONjap03G0018640.1 Alkaloid CODM/T6ODM medium borderline
LONjap03G0018710.1 Alkaloid CODM/T6ODM low borderline
LONjap03G0018720.1 Alkaloid CODM/T6ODM medium borderline
LONjap03G0018730.1 Alkaloid CODM/T6ODM medium borderline
LONjap03G0018740.1 Alkaloid CODM/T6ODM low borderline
LONjap03G0018770.1 Alkaloid CODM/T6ODM low borderline
LONjap03G0022050.1 Alkaloid CODM/T6ODM medium borderline
LONjap03G0027840.1 Alkaloid CODM/T6ODM medium borderline
LONjap03G0028660.1 Alkaloid CODM/T6ODM medium borderline
LONjap04G0005080.1 Alkaloid CODM/T6ODM medium borderline
LONjap04G0015250.1 Alkaloid CODM/T6ODM medium borderline
LONjap04G0020450.1 Alkaloid CODM/T6ODM medium borderline
LONjap04G0022850.1 Alkaloid CODM/T6ODM medium borderline