PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status
LONjap01G0018470.1 Alkaloid SLS medium borderline
LONjap01G0018600.1 Alkaloid SLS medium borderline
LONjap01G0018620.1 Alkaloid SLS medium borderline
LONjap01G0018670.1 Alkaloid SLS medium borderline
LONjap01G0018680.1 Alkaloid SLS medium borderline
LONjap01G0018710.1 Alkaloid SLS medium borderline
LONjap01G0018720.1 Alkaloid SLS medium borderline
LONjap01G0018740.1 Alkaloid SLS medium borderline
LONjap01G0018980.1 Alkaloid SLS medium borderline
LONjap01G0018990.1 Alkaloid SLS medium borderline
LONjap01G0019040.1 Alkaloid SLS medium borderline
LONjap01G0019100.1 Alkaloid SLS medium pass
LONjap01G0019150.1 Alkaloid SLS medium borderline
LONjap01G0019160.1 Alkaloid SLS medium pass
LONjap01G0019200.1 Alkaloid SLS medium borderline
LONjap01G0019210.1 Alkaloid SLS medium borderline
LONjap01G0019260.1 Alkaloid SLS medium borderline
LONjap01G0019270.1 Alkaloid SLS medium pass
LONjap01G0019290.1 Alkaloid SLS medium borderline
LONjap01G0019310.1 Alkaloid SLS medium borderline
LONjap01G0019330.1 Alkaloid SLS medium borderline
LONjap01G0019350.1 Alkaloid SLS medium borderline
LONjap01G0025730.1 Alkaloid SLS medium borderline
LONjap01G0035480.1 Alkaloid SLS medium borderline
LONjap01G0037890.1 Alkaloid SLS medium borderline
LONjap01G0045560.1 Alkaloid SLS medium borderline
LONjap02G0003090.1 Alkaloid SLS medium borderline
LONjap02G0031590.1 Alkaloid SLS medium borderline
LONjap02G0031600.1 Alkaloid SLS medium borderline
LONjap02G0031610.1 Alkaloid SLS medium borderline
LONjap02G0042930.1 Alkaloid SLS medium borderline
LONjap02G0045020.1 Alkaloid SLS medium borderline
LONjap03G0014250.1 Alkaloid SLS low borderline
LONjap03G0032280.1 Alkaloid SLS medium borderline
LONjap04G0010260.1 Alkaloid SLS medium borderline
LONjap04G0027610.1 Alkaloid SLS medium borderline
LONjap05G0003150.1 Alkaloid SLS medium borderline
LONjap05G0009260.1 Alkaloid SLS medium borderline
LONjap07G0005520.1 Alkaloid SLS medium borderline
LONjap07G0005540.1 Alkaloid SLS medium borderline
LONjap07G0005590.1 Alkaloid SLS medium borderline
LONjap07G0019500.1 Alkaloid SLS medium borderline
LONjap07G0024240.1 Alkaloid SLS medium borderline
LONjap09G0023510.1 Alkaloid SLS medium borderline
LONjap09G0027150.1 Alkaloid SLS medium borderline
LONjap09G0027160.1 Alkaloid SLS medium borderline
LONjap09G0027170.1 Alkaloid SLS medium borderline
LONjap09G0027180.1 Alkaloid SLS medium borderline
LONjap09G0027210.1 Alkaloid SLS medium borderline
LONjap09G0027220.1 Alkaloid SLS medium borderline