PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
LONjap01G0009850.1 Flavonoid 4CL medium pass
LONjap01G0035440.1 Flavonoid 4CL medium pass
LONjap01G0043150.1 Flavonoid 4CL low borderline
LONjap02G0009980.1 Flavonoid 4CL low borderline
LONjap02G0018820.1 Flavonoid 4CL low borderline
LONjap02G0026750.1 Flavonoid 4CL medium pass
LONjap02G0026780.1 Flavonoid 4CL medium pass
LONjap02G0027560.1 Flavonoid 4CL medium pass
LONjap02G0027610.1 Flavonoid 4CL medium pass
LONjap02G0050110.1 Flavonoid 4CL low borderline
LONjap03G0004810.1 Flavonoid 4CL low borderline
LONjap03G0007040.1 Flavonoid 4CL low borderline
LONjap03G0007290.1 Flavonoid 4CL medium pass
LONjap03G0007490.1 Flavonoid 4CL medium pass
LONjap03G0016180.1 Flavonoid 4CL low borderline
LONjap03G0020580.1 Flavonoid 4CL medium pass
LONjap03G0026860.1 Flavonoid 4CL medium pass
LONjap04G0000460.1 Flavonoid 4CL medium pass
LONjap04G0000590.1 Flavonoid 4CL medium pass
LONjap04G0013070.1 Flavonoid 4CL medium pass
LONjap04G0013090.1 Flavonoid 4CL medium pass
LONjap04G0013220.1 Flavonoid 4CL medium pass
LONjap05G0002420.1 Flavonoid 4CL low borderline
LONjap05G0004390.1 Flavonoid 4CL medium pass
LONjap05G0023550.1 Flavonoid 4CL low borderline
LONjap06G0013670.1 Flavonoid 4CL low borderline
LONjap06G0018820.1 Flavonoid 4CL medium pass
LONjap06G0026920.1 Flavonoid 4CL medium pass
LONjap06G0027260.1 Flavonoid 4CL medium pass
LONjap07G0003120.1 Flavonoid 4CL medium pass
LONjap07G0003140.1 Flavonoid 4CL medium pass
LONjap07G0003930.1 Flavonoid 4CL medium pass
LONjap07G0009140.1 Flavonoid 4CL low borderline
LONjap07G0016850.1 Flavonoid 4CL low borderline
LONjap07G0023550.1 Flavonoid 4CL low borderline
LONjap08G0007940.1 Flavonoid 4CL low borderline
LONjap08G0012560.1 Flavonoid 4CL low borderline
LONjap09G0010190.1 Flavonoid 4CL low borderline
LONjap09G0017400.1 Flavonoid 4CL medium pass
LONjapGWHAAZE000000940011050.1 Flavonoid 4CL medium pass
LONjap01G0013300.1 Flavonoid ANR medium borderline
LONjap01G0013310.1 Flavonoid ANR medium borderline
LONjap01G0013320.1 Flavonoid ANR medium borderline
LONjap01G0013330.1 Flavonoid ANR medium borderline
LONjap01G0047740.1 Flavonoid ANR medium borderline
LONjap02G0010100.1 Flavonoid ANR high pass
LONjap02G0031880.1 Flavonoid ANR medium borderline
LONjap02G0044170.1 Flavonoid ANR medium borderline
LONjap02G0044180.1 Flavonoid ANR medium borderline
LONjap03G0002390.1 Flavonoid ANR low borderline