PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
LONjap03G0002400.1 Flavonoid ANR low borderline
LONjap03G0010430.1 Flavonoid ANR medium borderline
LONjap03G0010480.1 Flavonoid ANR medium borderline
LONjap04G0027050.1 Flavonoid ANR low borderline
LONjap04G0027840.1 Flavonoid ANR medium borderline
LONjap04G0029240.1 Flavonoid ANR medium borderline
LONjap05G0004070.1 Flavonoid ANR medium borderline
LONjap05G0018880.1 Flavonoid ANR medium borderline
LONjap06G0023010.1 Flavonoid ANR low borderline
LONjap07G0016900.1 Flavonoid ANR low borderline
LONjap07G0018340.1 Flavonoid ANR medium borderline
LONjap09G0023290.1 Flavonoid ANR medium borderline
LONjap09G0023300.1 Flavonoid ANR medium pass
LONjap09G0023310.1 Flavonoid ANR medium borderline
LONjap09G0024720.1 Flavonoid ANR medium borderline
LONjap09G0027320.1 Flavonoid ANR medium borderline
LONjap09G0027330.1 Flavonoid ANR medium borderline
LONjap09G0027340.1 Flavonoid ANR medium borderline
LONjap09G0032200.1 Flavonoid ANR low borderline
LONjapGWHAAZE000000940010230.1 Flavonoid ANR low borderline
LONjap01G0025650.1 Flavonoid ANS/LDOX medium borderline
LONjap01G0027980.1 Flavonoid ANS/LDOX medium borderline
LONjap01G0044970.1 Flavonoid ANS/LDOX medium borderline
LONjap01G0045540.1 Flavonoid ANS/LDOX medium borderline
LONjap01G0047910.1 Flavonoid ANS/LDOX medium borderline
LONjap02G0008420.1 Flavonoid ANS/LDOX medium borderline
LONjap02G0011960.1 Flavonoid ANS/LDOX medium pass
LONjap02G0015760.1 Flavonoid ANS/LDOX medium borderline
LONjap02G0017490.1 Flavonoid ANS/LDOX medium borderline
LONjap02G0034600.1 Flavonoid ANS/LDOX medium pass
LONjap02G0035770.1 Flavonoid ANS/LDOX medium borderline
LONjap03G0011910.1 Flavonoid ANS/LDOX medium borderline
LONjap03G0018540.1 Flavonoid ANS/LDOX medium borderline
LONjap03G0018690.1 Flavonoid ANS/LDOX medium borderline
LONjap03G0018720.1 Flavonoid ANS/LDOX medium borderline
LONjap03G0028640.1 Flavonoid ANS/LDOX medium borderline
LONjap04G0015250.1 Flavonoid ANS/LDOX medium borderline
LONjap06G0017020.1 Flavonoid ANS/LDOX medium borderline
LONjap06G0017080.1 Flavonoid ANS/LDOX medium borderline
LONjap06G0017120.1 Flavonoid ANS/LDOX medium borderline
LONjap07G0009580.1 Flavonoid ANS/LDOX low borderline
LONjap07G0009650.1 Flavonoid ANS/LDOX low borderline
LONjap07G0009680.1 Flavonoid ANS/LDOX low borderline
LONjap08G0001180.1 Flavonoid ANS/LDOX medium borderline
LONjap08G0015160.1 Flavonoid ANS/LDOX medium borderline
LONjapGWHAAZE000000940011630.1 Flavonoid ANS/LDOX medium borderline
LONjapGWHAAZE000001220014710.1 Flavonoid ANS/LDOX medium borderline
LONjap01G0005650.1 Flavonoid C4H high pass
LONjap01G0005660.1 Flavonoid C4H medium borderline
LONjap01G0024870.1 Flavonoid C4H low borderline