PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
Reset
Gene Pathway Family Confidence Status
LONjap01G0005540.1 Steroid DWF4/CYP90B1 medium borderline
LONjap01G0005890.1 Steroid DWF4/CYP90B1 medium borderline
LONjap01G0010770.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0018430.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0018450.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0018460.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0018490.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0018510.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0018520.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0018630.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0019020.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0019060.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0019120.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0019140.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0019240.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0019340.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0019350.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0025730.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0030460.1 Steroid DWF4/CYP90B1 medium borderline
LONjap01G0030470.1 Steroid DWF4/CYP90B1 medium borderline
LONjap01G0030480.1 Steroid DWF4/CYP90B1 medium borderline
LONjap01G0035480.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0037780.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0037890.1 Steroid DWF4/CYP90B1 low borderline
LONjap01G0045560.1 Steroid DWF4/CYP90B1 medium borderline
LONjap02G0003090.1 Steroid DWF4/CYP90B1 low borderline
LONjap02G0008000.1 Steroid DWF4/CYP90B1 low borderline
LONjap02G0031590.1 Steroid DWF4/CYP90B1 low borderline
LONjap02G0031600.1 Steroid DWF4/CYP90B1 low borderline
LONjap02G0035250.1 Steroid DWF4/CYP90B1 medium borderline
LONjap02G0035330.1 Steroid DWF4/CYP90B1 medium borderline
LONjap02G0035400.1 Steroid DWF4/CYP90B1 medium borderline
LONjap02G0040150.1 Steroid DWF4/CYP90B1 low borderline
LONjap02G0044720.1 Steroid DWF4/CYP90B1 medium borderline
LONjap02G0044990.1 Steroid DWF4/CYP90B1 medium borderline
LONjap02G0045000.1 Steroid DWF4/CYP90B1 medium borderline
LONjap02G0045010.1 Steroid DWF4/CYP90B1 medium borderline
LONjap03G0012490.1 Steroid DWF4/CYP90B1 low borderline
LONjap03G0032280.1 Steroid DWF4/CYP90B1 low borderline
LONjap03G0032320.1 Steroid DWF4/CYP90B1 medium borderline
LONjap03G0032820.1 Steroid DWF4/CYP90B1 low borderline
LONjap04G0001890.1 Steroid DWF4/CYP90B1 medium borderline
LONjap04G0002630.1 Steroid DWF4/CYP90B1 low borderline
LONjap04G0006730.1 Steroid DWF4/CYP90B1 medium borderline
LONjap04G0008160.1 Steroid DWF4/CYP90B1 medium borderline
LONjap04G0010260.1 Steroid DWF4/CYP90B1 low borderline
LONjap04G0018700.1 Steroid DWF4/CYP90B1 medium pass
LONjap04G0027610.1 Steroid DWF4/CYP90B1 medium borderline
LONjap04G0030320.1 Steroid DWF4/CYP90B1 medium borderline
LONjap04G0032170.1 Steroid DWF4/CYP90B1 low borderline