PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
LONjap05G0003150.1 Steroid DWF4/CYP90B1 low borderline
LONjap05G0010690.1 Steroid DWF4/CYP90B1 medium borderline
LONjap05G0021870.1 Steroid DWF4/CYP90B1 medium borderline
LONjap05G0021880.1 Steroid DWF4/CYP90B1 medium borderline
LONjap05G0022090.1 Steroid DWF4/CYP90B1 medium borderline
LONjap05G0030770.1 Steroid DWF4/CYP90B1 medium borderline
LONjap05G0030780.1 Steroid DWF4/CYP90B1 low borderline
LONjap06G0009900.1 Steroid DWF4/CYP90B1 medium borderline
LONjap06G0010080.1 Steroid DWF4/CYP90B1 low borderline
LONjap06G0010090.1 Steroid DWF4/CYP90B1 medium borderline
LONjap06G0010180.1 Steroid DWF4/CYP90B1 medium borderline
LONjap06G0010400.1 Steroid DWF4/CYP90B1 medium borderline
LONjap06G0010460.1 Steroid DWF4/CYP90B1 low borderline
LONjap06G0010480.1 Steroid DWF4/CYP90B1 medium borderline
LONjap06G0020560.1 Steroid DWF4/CYP90B1 low borderline
LONjap07G0005520.1 Steroid DWF4/CYP90B1 low borderline
LONjap07G0005590.1 Steroid DWF4/CYP90B1 low borderline
LONjap07G0007600.1 Steroid DWF4/CYP90B1 medium borderline
LONjap07G0007620.1 Steroid DWF4/CYP90B1 medium borderline
LONjap07G0018140.1 Steroid DWF4/CYP90B1 low borderline
LONjap07G0023850.1 Steroid DWF4/CYP90B1 medium borderline
LONjap07G0026830.1 Steroid DWF4/CYP90B1 low borderline
LONjap07G0030210.1 Steroid DWF4/CYP90B1 medium pass
LONjap08G0000610.1 Steroid DWF4/CYP90B1 low borderline
LONjap08G0000620.1 Steroid DWF4/CYP90B1 low borderline
LONjap08G0001350.1 Steroid DWF4/CYP90B1 low borderline
LONjap08G0008030.1 Steroid DWF4/CYP90B1 medium borderline
LONjap08G0008400.1 Steroid DWF4/CYP90B1 low borderline
LONjap08G0008420.1 Steroid DWF4/CYP90B1 low borderline
LONjap08G0014260.1 Steroid DWF4/CYP90B1 low borderline
LONjap09G0014140.1 Steroid DWF4/CYP90B1 low borderline
LONjap09G0017000.1 Steroid DWF4/CYP90B1 low borderline
LONjap09G0027150.1 Steroid DWF4/CYP90B1 low borderline
LONjap09G0027170.1 Steroid DWF4/CYP90B1 low borderline
LONjap09G0027180.1 Steroid DWF4/CYP90B1 low borderline
LONjap09G0027210.1 Steroid DWF4/CYP90B1 low borderline
LONjap09G0027230.1 Steroid DWF4/CYP90B1 low borderline
LONjapGWHAAZE000000200001380.1 Steroid DWF4/CYP90B1 medium borderline
LONjapGWHAAZE000000360004560.1 Steroid DWF4/CYP90B1 medium borderline
LONjapGWHAAZE000000530005990.1 Steroid DWF4/CYP90B1 low borderline
LONjapGWHAAZE000000770007250.1 Steroid DWF4/CYP90B1 medium borderline
LONjapGWHAAZE000001200014600.1 Steroid DWF4/CYP90B1 low borderline
LONjapGWHAAZE000001390015600.1 Steroid DWF4/CYP90B1 low borderline