PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status
LONjap05G0015650.1 Flavonoid F3H medium borderline
LONjap05G0020960.1 Flavonoid F3H medium borderline
LONjap05G0020980.1 Flavonoid F3H low borderline
LONjap05G0021010.1 Flavonoid F3H medium pass
LONjap05G0021020.1 Flavonoid F3H medium borderline
LONjap05G0021040.1 Flavonoid F3H medium borderline
LONjap05G0021050.1 Flavonoid F3H low borderline
LONjap05G0021100.1 Flavonoid F3H medium borderline
LONjap06G0017000.1 Flavonoid F3H medium borderline
LONjap06G0017010.1 Flavonoid F3H medium borderline
LONjap06G0017030.1 Flavonoid F3H medium borderline
LONjap06G0017040.1 Flavonoid F3H medium pass
LONjap06G0017050.1 Flavonoid F3H medium borderline
LONjap06G0017060.1 Flavonoid F3H medium borderline
LONjap06G0017070.1 Flavonoid F3H medium borderline
LONjap06G0017100.1 Flavonoid F3H medium borderline
LONjap06G0017900.1 Flavonoid F3H medium borderline
LONjap06G0019350.1 Flavonoid F3H medium pass
LONjap06G0020860.1 Flavonoid F3H medium borderline
LONjap06G0021850.1 Flavonoid F3H medium borderline
LONjap07G0004090.1 Flavonoid F3H low borderline
LONjap07G0008500.1 Flavonoid F3H medium borderline
LONjap07G0008810.1 Flavonoid F3H medium borderline
LONjap07G0009560.1 Flavonoid F3H medium borderline
LONjap07G0009570.1 Flavonoid F3H medium borderline
LONjap07G0009660.1 Flavonoid F3H medium borderline
LONjap07G0009670.1 Flavonoid F3H medium borderline
LONjap07G0009690.1 Flavonoid F3H medium borderline
LONjap07G0009810.1 Flavonoid F3H medium pass
LONjap07G0013620.1 Flavonoid F3H medium borderline
LONjap07G0019010.1 Flavonoid F3H low borderline
LONjap07G0028500.1 Flavonoid F3H medium borderline
LONjap08G0003330.1 Flavonoid F3H medium borderline
LONjap08G0004170.1 Flavonoid F3H medium borderline
LONjap08G0007380.1 Flavonoid F3H medium borderline
LONjap08G0008300.1 Flavonoid F3H medium borderline
LONjap08G0008330.1 Flavonoid F3H medium borderline
LONjap08G0008340.1 Flavonoid F3H low borderline
LONjap08G0013360.1 Flavonoid F3H medium borderline
LONjap08G0015140.1 Flavonoid F3H low borderline
LONjap08G0015260.1 Flavonoid F3H medium borderline
LONjap08G0015830.1 Flavonoid F3H medium borderline
LONjap08G0024070.1 Flavonoid F3H medium borderline
LONjap08G0024080.1 Flavonoid F3H medium borderline
LONjap08G0024090.1 Flavonoid F3H medium borderline
LONjap08G0024100.1 Flavonoid F3H medium borderline
LONjap09G0006970.1 Flavonoid F3H medium borderline
LONjap09G0007210.1 Flavonoid F3H medium pass
LONjap09G0010050.1 Flavonoid F3H low borderline
LONjap09G0010060.1 Flavonoid F3H medium borderline