PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GS
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Gene Pathway Family Confidence Status
LONjap01G0004760.1 Alkaloid GS low borderline
LONjap01G0004790.1 Alkaloid GS low borderline
LONjap01G0004860.1 Alkaloid GS low borderline
LONjap01G0005350.1 Alkaloid GS high pass
LONjap01G0025940.1 Alkaloid GS high pass
LONjap01G0026580.1 Alkaloid GS low borderline
LONjap01G0033850.1 Alkaloid GS low borderline
LONjap01G0034280.1 Alkaloid GS low borderline
LONjap01G0047160.1 Alkaloid GS low borderline
LONjap02G0008800.1 Alkaloid GS high pass
LONjap02G0008820.1 Alkaloid GS high pass
LONjap02G0008840.1 Alkaloid GS medium pass
LONjap02G0008850.1 Alkaloid GS medium pass
LONjap02G0028080.1 Alkaloid GS high pass
LONjap02G0028100.1 Alkaloid GS high pass
LONjap02G0028170.1 Alkaloid GS high pass
LONjap02G0028200.1 Alkaloid GS high pass
LONjap02G0028210.1 Alkaloid GS medium pass
LONjap02G0028220.1 Alkaloid GS high pass
LONjap02G0028230.1 Alkaloid GS high pass
LONjap02G0028260.1 Alkaloid GS high pass
LONjap02G0030040.1 Alkaloid GS medium pass
LONjap02G0030350.1 Alkaloid GS high pass
LONjap02G0042150.1 Alkaloid GS low borderline
LONjap02G0045880.1 Alkaloid GS low borderline
LONjap03G0010890.1 Alkaloid GS low borderline
LONjap04G0000950.1 Alkaloid GS medium pass
LONjap04G0000960.1 Alkaloid GS high pass
LONjap04G0003290.1 Alkaloid GS low borderline
LONjap04G0013860.1 Alkaloid GS high pass
LONjap04G0013870.1 Alkaloid GS high pass
LONjap04G0013880.1 Alkaloid GS high pass
LONjap04G0029470.1 Alkaloid GS medium pass
LONjap05G0014240.1 Alkaloid GS high pass
LONjap06G0025770.1 Alkaloid GS low borderline
LONjap06G0027050.1 Alkaloid GS high pass
LONjap07G0002780.1 Alkaloid GS high pass
LONjap08G0001060.1 Alkaloid GS medium pass
LONjap08G0001070.1 Alkaloid GS medium pass
LONjap08G0001080.1 Alkaloid GS medium pass
LONjap08G0001090.1 Alkaloid GS medium pass
LONjap09G0007690.1 Alkaloid GS high pass
LONjap09G0023500.1 Alkaloid GS low borderline
LONjapGWHAAZE000000400005020.1 Alkaloid GS high pass
LONjapGWHAAZE000000400005030.1 Alkaloid GS high pass
LONjapGWHAAZE000000400005040.1 Alkaloid GS high pass
LONjapGWHAAZE000000400005050.1 Alkaloid GS high pass
LONjapGWHAAZE000000400005060.1 Alkaloid GS medium pass
LONjapGWHAAZE000000400005070.1 Alkaloid GS high pass
LONjapGWHAAZE000000400005080.1 Alkaloid GS high pass