PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap08G0003330.1 Flavonoid F3H medium borderline
LONjap08G0004170.1 Flavonoid F3H medium borderline
LONjap08G0007380.1 Flavonoid F3H medium borderline
LONjap08G0008300.1 Flavonoid F3H medium borderline
LONjap08G0008330.1 Flavonoid F3H medium borderline
LONjap08G0008340.1 Flavonoid F3H low borderline
LONjap08G0013360.1 Flavonoid F3H medium borderline
LONjap08G0015140.1 Flavonoid F3H low borderline
LONjap08G0015260.1 Flavonoid F3H medium borderline
LONjap08G0015830.1 Flavonoid F3H medium borderline
LONjap08G0024070.1 Flavonoid F3H medium borderline
LONjap08G0024080.1 Flavonoid F3H medium borderline
LONjap08G0024090.1 Flavonoid F3H medium borderline
LONjap08G0024100.1 Flavonoid F3H medium borderline
LONjap09G0006970.1 Flavonoid F3H medium borderline
LONjap09G0007210.1 Flavonoid F3H medium pass
LONjap09G0010050.1 Flavonoid F3H low borderline
LONjap09G0010060.1 Flavonoid F3H medium borderline
LONjap09G0010070.1 Flavonoid F3H medium borderline
LONjap09G0010080.1 Flavonoid F3H medium borderline
LONjap09G0010090.1 Flavonoid F3H low borderline
LONjap09G0019430.1 Flavonoid F3H low borderline
LONjap09G0022550.1 Flavonoid F3H medium borderline
LONjap09G0022850.1 Flavonoid F3H low borderline
LONjap09G0023590.1 Flavonoid F3H medium borderline
LONjap09G0024170.1 Flavonoid F3H low borderline
LONjap09G0027370.1 Flavonoid F3H medium borderline
LONjap09G0031060.1 Flavonoid F3H medium borderline
LONjapGWHAAZE000000640006950.1 Flavonoid F3H medium borderline
LONjapGWHAAZE000000850007900.1 Flavonoid F3H medium borderline
LONjap02G0047420.1 Flavonoid FLS medium borderline
LONjap06G0017110.1 Flavonoid FLS low borderline
LONjap07G0014820.1 Flavonoid FLS low borderline
LONjap01G0005700.1 Flavonoid FNS medium borderline
LONjap01G0005710.1 Flavonoid FNS medium borderline
LONjap01G0005720.1 Flavonoid FNS medium borderline
LONjap01G0005830.1 Flavonoid FNS low borderline
LONjap01G0005870.1 Flavonoid FNS medium borderline
LONjap01G0005880.1 Flavonoid FNS medium borderline
LONjap01G0005900.1 Flavonoid FNS medium borderline
LONjap01G0005910.1 Flavonoid FNS medium borderline
LONjap02G0003090.1 Flavonoid FNS medium borderline
LONjap02G0027490.1 Flavonoid FNS medium borderline
LONjap02G0029450.1 Flavonoid FNS medium borderline
LONjap02G0036400.1 Flavonoid FNS medium borderline
LONjap03G0005380.1 Flavonoid FNS medium borderline
LONjap03G0008970.1 Flavonoid FNS medium borderline
LONjap03G0009250.1 Flavonoid FNS medium borderline
LONjap03G0012480.1 Flavonoid FNS medium borderline
LONjap03G0023810.1 Flavonoid FNS medium borderline