PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap07G0007710.1 Alkaloid BBE medium borderline
LONjap07G0007720.1 Alkaloid BBE medium borderline
LONjap07G0007730.1 Alkaloid BBE medium borderline
LONjap07G0007740.1 Alkaloid BBE medium borderline
LONjap07G0007750.1 Alkaloid BBE medium borderline
LONjap07G0007760.1 Alkaloid BBE medium borderline
LONjap07G0007770.1 Alkaloid BBE medium borderline
LONjap07G0007780.1 Alkaloid BBE medium borderline
LONjap07G0007790.1 Alkaloid BBE medium borderline
LONjap07G0007800.1 Alkaloid BBE medium borderline
LONjap07G0007820.1 Alkaloid BBE medium borderline
LONjap07G0007840.1 Alkaloid BBE medium borderline
LONjap08G0005450.1 Alkaloid BBE medium borderline
LONjap08G0005460.1 Alkaloid BBE medium borderline
LONjap08G0022820.1 Alkaloid BBE low borderline
LONjap08G0024210.1 Alkaloid BBE medium borderline
LONjap08G0024300.1 Alkaloid BBE medium borderline
LONjap09G0002230.1 Alkaloid BBE medium borderline
LONjap09G0002240.1 Alkaloid BBE medium borderline
LONjap09G0004490.1 Alkaloid BBE medium borderline
LONjap09G0004500.1 Alkaloid BBE medium borderline
LONjap09G0005560.1 Alkaloid BBE medium borderline
LONjap09G0005580.1 Alkaloid BBE medium borderline
LONjap09G0005600.1 Alkaloid BBE medium borderline
LONjap09G0005620.1 Alkaloid BBE medium borderline
LONjap09G0014360.1 Alkaloid BBE low borderline
LONjap09G0028240.1 Alkaloid BBE medium borderline
LONjap09G0028260.1 Alkaloid BBE medium borderline
LONjap09G0030490.1 Alkaloid BBE medium borderline
LONjapGWHAAZE000000210002350.1 Alkaloid BBE medium borderline
LONjapGWHAAZE000001410015740.1 Alkaloid BBE medium borderline
LONjap04G0011200.1 Alkaloid CNMT low borderline
LONjap05G0011410.1 Alkaloid CNMT low borderline
LONjap06G0014330.1 Alkaloid CNMT low borderline
LONjap08G0020350.1 Alkaloid CNMT medium borderline
LONjap08G0020370.1 Alkaloid CNMT medium borderline
LONjap01G0006590.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016040.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016050.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016080.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016150.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016160.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0016180.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0024090.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0025600.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0025630.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0025640.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0027980.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0033010.1 Alkaloid CODM/T6ODM medium borderline
LONjap01G0034810.1 Alkaloid CODM/T6ODM medium borderline