PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap01G0021420.1 Phenylpropanoid COMT medium pass
LONjap01G0021430.1 Phenylpropanoid COMT low borderline
LONjap01G0021450.1 Phenylpropanoid COMT medium pass
LONjap01G0021460.1 Phenylpropanoid COMT low borderline
LONjap01G0022120.1 Phenylpropanoid COMT medium pass
LONjap01G0022220.1 Phenylpropanoid COMT medium pass
LONjap01G0037180.1 Phenylpropanoid COMT medium pass
LONjap02G0009040.1 Phenylpropanoid COMT medium pass
LONjap02G0009050.1 Phenylpropanoid COMT medium pass
LONjap02G0047790.1 Phenylpropanoid COMT low borderline
LONjap03G0019800.1 Phenylpropanoid COMT low borderline
LONjap03G0024450.1 Phenylpropanoid COMT medium pass
LONjap04G0021360.1 Phenylpropanoid COMT medium pass
LONjap04G0021370.1 Phenylpropanoid COMT medium pass
LONjap05G0006730.1 Phenylpropanoid COMT low borderline
LONjap06G0019960.1 Phenylpropanoid COMT low borderline
LONjap07G0008510.1 Phenylpropanoid COMT medium pass
LONjap07G0008820.1 Phenylpropanoid COMT medium pass
LONjap07G0008830.1 Phenylpropanoid COMT medium pass
LONjap07G0008890.1 Phenylpropanoid COMT medium pass
LONjap07G0008900.1 Phenylpropanoid COMT medium pass
LONjap07G0008910.1 Phenylpropanoid COMT medium pass
LONjap07G0008920.1 Phenylpropanoid COMT medium pass
LONjap08G0005940.1 Phenylpropanoid COMT medium pass
LONjap09G0012460.1 Phenylpropanoid COMT medium pass
LONjapGWHAAZE000000480005630.1 Phenylpropanoid COMT medium pass
LONjapGWHAAZE000000480005640.1 Phenylpropanoid COMT medium pass
LONjap01G0020610.1 Phenylpropanoid CSE medium pass
LONjap01G0020630.1 Phenylpropanoid CSE medium pass
LONjap01G0020650.1 Phenylpropanoid CSE medium pass
LONjap01G0020660.1 Phenylpropanoid CSE medium pass
LONjap01G0020740.1 Phenylpropanoid CSE medium pass
LONjap01G0020880.1 Phenylpropanoid CSE medium pass
LONjap01G0025550.1 Phenylpropanoid CSE medium pass
LONjap01G0025700.1 Phenylpropanoid CSE low borderline
LONjap01G0025710.1 Phenylpropanoid CSE medium pass
LONjap01G0030660.1 Phenylpropanoid CSE medium pass
LONjap01G0031630.1 Phenylpropanoid CSE medium pass
LONjap01G0045760.1 Phenylpropanoid CSE medium pass
LONjap01G0045850.1 Phenylpropanoid CSE medium pass
LONjap01G0045890.1 Phenylpropanoid CSE medium pass
LONjap01G0045900.1 Phenylpropanoid CSE medium pass
LONjap01G0045910.1 Phenylpropanoid CSE medium pass
LONjap01G0046200.1 Phenylpropanoid CSE medium pass
LONjap01G0047000.1 Phenylpropanoid CSE medium pass
LONjap01G0047010.1 Phenylpropanoid CSE medium pass
LONjap01G0047020.1 Phenylpropanoid CSE medium pass
LONjap01G0047030.1 Phenylpropanoid CSE medium pass
LONjap02G0018810.1 Phenylpropanoid CSE medium pass
LONjap02G0024290.1 Phenylpropanoid CSE medium pass