PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap09G0002720.1 Alkaloid NMT medium borderline
LONjap09G0012410.1 Alkaloid NMT medium borderline
LONjap09G0018280.1 Alkaloid NMT low borderline
LONjap09G0025180.1 Alkaloid NMT low borderline
LONjap09G0027250.1 Alkaloid NMT medium pass
LONjap09G0028040.1 Alkaloid NMT medium pass
LONjap09G0028540.1 Alkaloid NMT medium borderline
LONjapGWHAAZE000000480005640.1 Alkaloid NMT medium pass
LONjapGWHAAZE000000990011990.1 Alkaloid NMT medium pass
LONjap04G0028760.1 Alkaloid ODC low borderline
LONjap01G0000280.1 Alkaloid PMT medium pass
LONjap01G0033110.1 Alkaloid PMT low borderline
LONjap01G0036350.1 Alkaloid PMT medium borderline
LONjap01G0040450.1 Alkaloid PMT medium pass
LONjap01G0040460.1 Alkaloid PMT low borderline
LONjap01G0040470.1 Alkaloid PMT low borderline
LONjap01G0040520.1 Alkaloid PMT medium pass
LONjap01G0040530.1 Alkaloid PMT medium pass
LONjap01G0040540.1 Alkaloid PMT medium pass
LONjap03G0016070.1 Alkaloid PMT medium pass
LONjap03G0033790.1 Alkaloid PMT medium borderline
LONjap04G0001810.1 Alkaloid PMT low borderline
LONjap05G0005060.1 Alkaloid PMT low borderline
LONjap06G0005000.1 Alkaloid PMT medium pass
LONjap06G0005010.1 Alkaloid PMT medium pass
LONjap06G0005120.1 Alkaloid PMT medium pass
LONjap06G0013770.1 Alkaloid PMT low borderline
LONjap06G0025640.1 Alkaloid PMT medium borderline
LONjap08G0007790.1 Alkaloid PMT medium pass
LONjap08G0020080.1 Alkaloid PMT medium pass
LONjap09G0001020.1 Alkaloid PMT low borderline
LONjap09G0001190.1 Alkaloid PMT medium pass
LONjap09G0011110.1 Alkaloid PMT medium pass
LONjap09G0017910.1 Alkaloid PMT low borderline
LONjap09G0018620.1 Alkaloid PMT low borderline
LONjap01G0008220.1 Alkaloid PYKS low borderline
LONjap01G0031600.1 Alkaloid PYKS low borderline
LONjap02G0024330.1 Alkaloid PYKS low borderline
LONjap02G0042340.1 Alkaloid PYKS low borderline
LONjap02G0047720.1 Alkaloid PYKS low borderline
LONjap02G0047730.1 Alkaloid PYKS low borderline
LONjap03G0008140.1 Alkaloid PYKS low borderline
LONjap03G0011200.1 Alkaloid PYKS high pass
LONjap03G0015010.1 Alkaloid PYKS low borderline
LONjap03G0015020.1 Alkaloid PYKS low borderline
LONjap03G0015030.1 Alkaloid PYKS low borderline
LONjap03G0031460.1 Alkaloid PYKS low borderline
LONjap04G0002020.1 Alkaloid PYKS low borderline
LONjap04G0010270.1 Alkaloid PYKS low borderline
LONjap05G0012080.1 Alkaloid PYKS medium pass