PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2547
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
LONjap08G0010940.1 Steroid CAS low borderline
LONjap09G0014450.1 Steroid CAS medium pass
LONjap09G0024280.1 Steroid CAS medium pass
LONjap09G0029150.1 Steroid CAS medium pass
LONjap09G0029160.1 Steroid CAS medium pass
LONjap09G0029290.1 Steroid CAS medium pass
LONjap09G0029300.1 Steroid CAS medium pass
LONjapGWHAAZE000000210001960.1 Steroid CAS medium pass
LONjapGWHAAZE000000210001980.1 Steroid CAS medium pass
LONjapGWHAAZE000000210001990.1 Steroid CAS low borderline
LONjapGWHAAZE000001200014590.1 Steroid CAS medium pass
LONjap01G0022460.1 Steroid CPD/CYP90A1 medium borderline
LONjap01G0030440.1 Steroid CPD/CYP90A1 low borderline
LONjap01G0030450.1 Steroid CPD/CYP90A1 low borderline
LONjap01G0030490.1 Steroid CPD/CYP90A1 low borderline
LONjap02G0022750.1 Steroid CPD/CYP90A1 low borderline
LONjap02G0022770.1 Steroid CPD/CYP90A1 low borderline
LONjap02G0022780.1 Steroid CPD/CYP90A1 low borderline
LONjap02G0029710.1 Steroid CPD/CYP90A1 low borderline
LONjap02G0032400.1 Steroid CPD/CYP90A1 low borderline
LONjap03G0006160.1 Steroid CPD/CYP90A1 medium borderline
LONjap03G0030290.1 Steroid CPD/CYP90A1 medium borderline
LONjap04G0001440.1 Steroid CPD/CYP90A1 low borderline
LONjap04G0018420.1 Steroid CPD/CYP90A1 medium borderline
LONjap04G0018470.1 Steroid CPD/CYP90A1 medium borderline
LONjap04G0018490.1 Steroid CPD/CYP90A1 medium borderline
LONjap05G0005440.1 Steroid CPD/CYP90A1 low borderline
LONjap05G0009230.1 Steroid CPD/CYP90A1 low borderline
LONjap06G0010100.1 Steroid CPD/CYP90A1 medium borderline
LONjap06G0010120.1 Steroid CPD/CYP90A1 medium borderline
LONjap06G0010220.1 Steroid CPD/CYP90A1 medium borderline
LONjap07G0007640.1 Steroid CPD/CYP90A1 medium borderline
LONjap07G0010490.1 Steroid CPD/CYP90A1 medium borderline
LONjap07G0030200.1 Steroid CPD/CYP90A1 medium borderline
LONjap07G0030380.1 Steroid CPD/CYP90A1 medium borderline
LONjap08G0013140.1 Steroid CPD/CYP90A1 medium borderline
LONjap08G0014070.1 Steroid CPD/CYP90A1 low borderline
LONjap08G0014080.1 Steroid CPD/CYP90A1 low borderline
LONjap08G0014100.1 Steroid CPD/CYP90A1 low borderline
LONjap08G0018650.1 Steroid CPD/CYP90A1 low borderline
LONjap08G0018670.1 Steroid CPD/CYP90A1 low borderline
LONjap08G0018680.1 Steroid CPD/CYP90A1 low borderline
LONjap09G0023510.1 Steroid CPD/CYP90A1 low borderline
LONjapGWHAAZE000000280003720.1 Steroid CPD/CYP90A1 low borderline
LONjapGWHAAZE000000360004550.1 Steroid CPD/CYP90A1 medium borderline
LONjapGWHAAZE000001080013400.1 Steroid CPD/CYP90A1 medium borderline
LONjap09G0017520.1 Steroid CPI1 high pass
LONjap02G0007670.1 Steroid CYP51G1 medium borderline
LONjap02G0007680.1 Steroid CYP51G1 medium borderline
LONjap02G0012360.1 Steroid CYP51G1 medium borderline