PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap05G0008320.1 Terpenoid CYP71 medium borderline
LONjap05G0011800.1 Terpenoid CYP71 medium pass
LONjap05G0012000.1 Terpenoid CYP71 medium pass
LONjap06G0009850.1 Terpenoid CYP71 low borderline
LONjap06G0009890.1 Terpenoid CYP71 low borderline
LONjap06G0009910.1 Terpenoid CYP71 low borderline
LONjap06G0010090.1 Terpenoid CYP71 low borderline
LONjap06G0010100.1 Terpenoid CYP71 low borderline
LONjap06G0010180.1 Terpenoid CYP71 low borderline
LONjap06G0010220.1 Terpenoid CYP71 low borderline
LONjap06G0010400.1 Terpenoid CYP71 low borderline
LONjap06G0010460.1 Terpenoid CYP71 low borderline
LONjap06G0027470.1 Terpenoid CYP71 medium pass
LONjap07G0003280.1 Terpenoid CYP71 low borderline
LONjap07G0003380.1 Terpenoid CYP71 low borderline
LONjap07G0006380.1 Terpenoid CYP71 medium pass
LONjap07G0007600.1 Terpenoid CYP71 low borderline
LONjap07G0007620.1 Terpenoid CYP71 low borderline
LONjap07G0030200.1 Terpenoid CYP71 low borderline
LONjap07G0030210.1 Terpenoid CYP71 low borderline
LONjap07G0030340.1 Terpenoid CYP71 low borderline
LONjap07G0030350.1 Terpenoid CYP71 low borderline
LONjap07G0030380.1 Terpenoid CYP71 low borderline
LONjap08G0021530.1 Terpenoid CYP71 low borderline
LONjap08G0021540.1 Terpenoid CYP71 low borderline
LONjap08G0021650.1 Terpenoid CYP71 low borderline
LONjap08G0021660.1 Terpenoid CYP71 low borderline
LONjap09G0009920.1 Terpenoid CYP71 low borderline
LONjap09G0012050.1 Terpenoid CYP71 medium pass
LONjap09G0014100.1 Terpenoid CYP71 medium borderline
LONjap09G0023470.1 Terpenoid CYP71 medium pass
LONjapGWHAAZE000000200001380.1 Terpenoid CYP71 low borderline
LONjap01G0000640.1 Terpenoid CYP76 low borderline
LONjap01G0005540.1 Terpenoid CYP76 low borderline
LONjap01G0005650.1 Terpenoid CYP76 low borderline
LONjap01G0005660.1 Terpenoid CYP76 medium borderline
LONjap01G0005700.1 Terpenoid CYP76 low borderline
LONjap01G0005710.1 Terpenoid CYP76 medium pass
LONjap01G0005720.1 Terpenoid CYP76 medium pass
LONjap01G0005730.1 Terpenoid CYP76 medium pass
LONjap01G0005740.1 Terpenoid CYP76 medium pass
LONjap01G0005760.1 Terpenoid CYP76 low borderline
LONjap01G0005770.1 Terpenoid CYP76 low borderline
LONjap01G0005790.1 Terpenoid CYP76 low borderline
LONjap01G0005810.1 Terpenoid CYP76 medium pass
LONjap01G0005830.1 Terpenoid CYP76 low borderline
LONjap01G0005840.1 Terpenoid CYP76 low borderline
LONjap01G0005850.1 Terpenoid CYP76 low borderline
LONjap01G0005860.1 Terpenoid CYP76 medium pass
LONjap01G0005870.1 Terpenoid CYP76 medium pass