PlantSME Plant secondary metabolism enzyme database

Lonicera japonica (lonicera_japonica)

Imported from atlas release summary for Lonicera japonica.

2714
Candidate Protein Records
2547
Pathway-Level Records
5787
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 878 20 UGT (373) View species results
Alkaloid pathway 625 24 7DLGT (175) View species results
Phenylpropanoid pathway 422 13 POD (148) View species results
Flavonoid pathway 377 15 UFGT (279) View species results
Steroid pathway 138 13 CAS (71) View species results
Rosmarinic acid pathway 107 7 C4H (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2159 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 356 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
LONjap02G0005470.1 Flavonoid F3H medium borderline
LONjap02G0005500.1 Flavonoid F3H medium borderline
LONjap02G0007410.1 Flavonoid F3H medium borderline
LONjap02G0008360.1 Flavonoid F3H medium borderline
LONjap02G0008440.1 Flavonoid F3H medium borderline
LONjap02G0009020.1 Flavonoid F3H medium borderline
LONjap02G0009030.1 Flavonoid F3H medium borderline
LONjap02G0011970.1 Flavonoid F3H medium borderline
LONjap02G0015060.1 Flavonoid F3H low borderline
LONjap02G0029860.1 Flavonoid F3H medium borderline
LONjap02G0029880.1 Flavonoid F3H medium borderline
LONjap02G0031290.1 Flavonoid F3H medium borderline
LONjap02G0034610.1 Flavonoid F3H medium borderline
LONjap02G0034640.1 Flavonoid F3H medium borderline
LONjap02G0034650.1 Flavonoid F3H medium borderline
LONjap02G0034710.1 Flavonoid F3H medium pass
LONjap02G0047320.1 Flavonoid F3H medium borderline
LONjap02G0047330.1 Flavonoid F3H medium borderline
LONjap02G0050160.1 Flavonoid F3H medium pass
LONjap02G0050170.1 Flavonoid F3H low borderline
LONjap03G0011880.1 Flavonoid F3H low borderline
LONjap03G0018530.1 Flavonoid F3H medium borderline
LONjap03G0018550.1 Flavonoid F3H low borderline
LONjap03G0018560.1 Flavonoid F3H low borderline
LONjap03G0018570.1 Flavonoid F3H low borderline
LONjap03G0018590.1 Flavonoid F3H low borderline
LONjap03G0018600.1 Flavonoid F3H medium pass
LONjap03G0018610.1 Flavonoid F3H medium pass
LONjap03G0018640.1 Flavonoid F3H medium borderline
LONjap03G0018660.1 Flavonoid F3H medium pass
LONjap03G0018670.1 Flavonoid F3H low borderline
LONjap03G0018680.1 Flavonoid F3H medium pass
LONjap03G0018700.1 Flavonoid F3H medium borderline
LONjap03G0018730.1 Flavonoid F3H low borderline
LONjap03G0018780.1 Flavonoid F3H medium borderline
LONjap03G0020960.1 Flavonoid F3H low borderline
LONjap03G0022050.1 Flavonoid F3H medium borderline
LONjap03G0024460.1 Flavonoid F3H medium borderline
LONjap03G0024470.1 Flavonoid F3H medium borderline
LONjap03G0027840.1 Flavonoid F3H medium borderline
LONjap03G0028650.1 Flavonoid F3H medium borderline
LONjap03G0028670.1 Flavonoid F3H medium pass
LONjap04G0001230.1 Flavonoid F3H medium borderline
LONjap04G0005080.1 Flavonoid F3H medium borderline
LONjap04G0008450.1 Flavonoid F3H low borderline
LONjap04G0016440.1 Flavonoid F3H low borderline
LONjap04G0016460.1 Flavonoid F3H low borderline
LONjap04G0020410.1 Flavonoid F3H medium borderline
LONjap04G0020420.1 Flavonoid F3H medium borderline
LONjap04G0020430.1 Flavonoid F3H medium borderline