PlantSME Plant secondary metabolism enzyme database

Oryza glaberrima (oryza_glaberrima)

Imported from atlas release summary for Oryza glaberrima.

1854
Candidate Protein Records
1650
Pathway-Level Records
3976
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 457 19 UGT (179) View species results
Alkaloid pathway 371 23 7DLGT (76) View species results
Phenylpropanoid pathway 341 13 POD (176) View species results
Flavonoid pathway 266 13 UFGT (169) View species results
Rosmarinic acid pathway 129 7 C4H (67) View species results
Steroid pathway 86 14 SMT1/SMT2/SMT3 (36) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1542 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 283 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ORGLA02G0008800.1 Steroid CYP51G1 medium borderline
ORGLA02G0059500.1 Steroid CYP51G1 medium borderline
ORGLA02G0059600.1 Steroid CYP51G1 medium borderline
ORGLA02G0059900.1 Steroid CYP51G1 medium borderline
ORGLA02G0126400.1 Steroid CYP51G1 medium borderline
ORGLA02G0198400.1 Steroid CYP51G1 medium borderline
ORGLA02G0361000.1 Steroid CYP51G1 medium borderline
ORGLA05G0061200.1 Steroid CYP51G1 medium borderline
ORGLA05G0114500.1 Steroid CYP51G1 medium borderline
ORGLA05G0143300.1 Steroid CYP51G1 medium borderline
ORGLA05G0143400.1 Steroid CYP51G1 medium borderline
ORGLA05G0198800.1 Steroid CYP51G1 medium borderline
ORGLA06G0096600.1 Steroid CYP51G1 medium borderline
ORGLA06G0186200.1 Steroid CYP51G1 medium borderline
ORGLA06G0186400.1 Steroid CYP51G1 medium borderline
ORGLA06G0186600.1 Steroid CYP51G1 medium borderline
ORGLA06G0186900.1 Steroid CYP51G1 medium borderline
ORGLA07G0142900.1 Steroid CYP51G1 low borderline
ORGLA07G0244000.1 Steroid CYP51G1 medium borderline
ORGLA11G0129900.1 Steroid CYP51G1 medium borderline
ORGLA01G0134000.1 Steroid CYP90D1 low borderline
ORGLA01G0189800.1 Steroid CYP90D1 low borderline
ORGLA03G0007900.1 Steroid CYP90D1 low borderline
ORGLA03G0102600.1 Steroid CYP90D1 low borderline
ORGLA03G0235500.1 Steroid CYP90D1 medium borderline
ORGLA03G0378900.1 Steroid CYP90D1 low borderline
ORGLA04G0010700.1 Steroid CYP90D1 low borderline
ORGLA04G0126200.1 Steroid CYP90D1 medium borderline
ORGLA04G0191500.1 Steroid CYP90D1 medium borderline
ORGLA05G0139300.1 Steroid CYP90D1 low borderline
ORGLA06G0264200.1 Steroid CYP90D1 low borderline
ORGLA07G0134900.1 Steroid CYP90D1 medium borderline
ORGLA07G0135000.1 Steroid CYP90D1 medium borderline
ORGLA07G0135600.1 Steroid CYP90D1 medium borderline
ORGLA07G0135700.1 Steroid CYP90D1 medium pass
ORGLA07G0135800.1 Steroid CYP90D1 medium borderline
ORGLA07G0189200.1 Steroid CYP90D1 low borderline
ORGLA07G0208500.1 Steroid CYP90D1 low borderline
ORGLA07G0223900.1 Steroid CYP90D1 low borderline
ORGLA07G0230100.1 Steroid CYP90D1 low borderline
ORGLA09G0062700.1 Steroid CYP90D1 low borderline
ORGLA09G0134300.1 Steroid CYP90D1 low borderline
ORGLA10G0030800.1 Steroid CYP90D1 low borderline
ORGLA10G0057800.1 Steroid CYP90D1 low borderline
ORGLA10G0068200.1 Steroid CYP90D1 medium borderline
ORGLA11G0024300.1 Steroid CYP90D1 medium borderline
ORGLA11G0199500.1 Steroid CYP90D1 low borderline
ORGLA12G0022400.1 Steroid CYP90D1 medium borderline
ORGLA01G0027700.1 Steroid DET2 low borderline
ORGLA01G0313100.1 Steroid DET2 medium pass