PlantSME Plant secondary metabolism enzyme database

Oryza glaberrima (oryza_glaberrima)

Imported from atlas release summary for Oryza glaberrima.

1854
Candidate Protein Records
1650
Pathway-Level Records
3976
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 457 19 UGT (179) View species results
Alkaloid pathway 371 23 7DLGT (76) View species results
Phenylpropanoid pathway 341 13 POD (176) View species results
Flavonoid pathway 266 13 UFGT (169) View species results
Rosmarinic acid pathway 129 7 C4H (67) View species results
Steroid pathway 86 14 SMT1/SMT2/SMT3 (36) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1542 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 283 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
ORGLA10G0000800.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA10G0090200.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA10G0122900.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA11G0061000.1 Steroid SMT1/SMT2/SMT3 low borderline
ORGLA11G0090800.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA11G0099000.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA11G0099500.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA11G0099700.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA11G0100500.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA11G0109700.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA12G0072100.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA12G0155900.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA12G0156000.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA12G0201500.1 Steroid SMT1/SMT2/SMT3 medium pass
ORGLA03G0089800.1 Steroid SQE medium pass
ORGLA03G0089900.1 Steroid SQE medium pass
ORGLA03G0346600.1 Steroid SQS/FDFT1 high pass
ORGLA06G0002200.1 Steroid SQS/FDFT1 low borderline
ORGLA06G0287600.1 Steroid SQS/FDFT1 medium pass
ORGLA07G0054800.1 Steroid SQS/FDFT1 high pass
ORGLA09G0153600.1 Steroid SQS/FDFT1 medium pass
ORGLA12G0167800.1 Steroid SQS/FDFT1 medium pass
ORGLA01G0006500.1 Terpenoid AACT medium borderline
ORGLA02G0069100.1 Terpenoid AACT low borderline
ORGLA02G0325800.1 Terpenoid AACT medium borderline
ORGLA07G0004100.1 Terpenoid AACT low borderline
ORGLA09G0020200.1 Terpenoid AACT low borderline
ORGLA10G0108200.1 Terpenoid AACT medium borderline
ORGLA01G0003100.1 Terpenoid BAHD medium pass
ORGLA01G0033800.1 Terpenoid BAHD low borderline
ORGLA01G0047500.1 Terpenoid BAHD medium pass
ORGLA01G0051800.1 Terpenoid BAHD medium pass
ORGLA01G0063100.1 Terpenoid BAHD low borderline
ORGLA01G0086800.1 Terpenoid BAHD medium pass
ORGLA01G0102200.1 Terpenoid BAHD low borderline
ORGLA01G0102900.1 Terpenoid BAHD medium pass
ORGLA01G0105400.1 Terpenoid BAHD medium pass
ORGLA01G0109000.1 Terpenoid BAHD medium pass
ORGLA01G0115700.1 Terpenoid BAHD medium pass
ORGLA01G0117100.1 Terpenoid BAHD medium pass
ORGLA01G0117200.1 Terpenoid BAHD low borderline
ORGLA01G0121100.1 Terpenoid BAHD medium pass
ORGLA01G0131800.1 Terpenoid BAHD low borderline
ORGLA01G0182300.1 Terpenoid BAHD medium pass
ORGLA01G0190500.1 Terpenoid BAHD low borderline
ORGLA01G0191500.1 Terpenoid BAHD medium pass
ORGLA01G0201400.1 Terpenoid BAHD medium pass
ORGLA01G0217900.1 Terpenoid BAHD medium pass
ORGLA01G0240900.1 Terpenoid BAHD medium pass
ORGLA01G0271600.1 Terpenoid BAHD medium pass