PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Gene Pathway Family Confidence Status
PHvul02G0016560.1 Alkaloid 7DLH medium borderline
PHvul02G0028910.1 Alkaloid 7DLH medium borderline
PHvul03G0003380.1 Alkaloid 7DLH medium borderline
PHvul03G0003380.2 Alkaloid 7DLH medium borderline
PHvul04G0000520.1 Alkaloid 7DLH medium borderline
PHvul04G0000530.1 Alkaloid 7DLH medium borderline
PHvul04G0000540.1 Alkaloid 7DLH medium borderline
PHvul04G0000550.1 Alkaloid 7DLH medium borderline
PHvul04G0000560.1 Alkaloid 7DLH medium borderline
PHvul04G0000570.1 Alkaloid 7DLH medium borderline
PHvul05G0001530.2 Alkaloid 7DLH low borderline
PHvul05G0006270.1 Alkaloid 7DLH medium borderline
PHvul05G0006280.1 Alkaloid 7DLH medium borderline
PHvul05G0006290.1 Alkaloid 7DLH medium borderline
PHvul05G0006300.1 Alkaloid 7DLH medium borderline
PHvul05G0006300.2 Alkaloid 7DLH medium borderline
PHvul05G0006320.1 Alkaloid 7DLH medium borderline
PHvul05G0006330.1 Alkaloid 7DLH medium borderline
PHvul06G0006290.1 Alkaloid 7DLH medium borderline
PHvul09G0008380.1 Alkaloid 7DLH medium borderline
PHvul09G0008400.1 Alkaloid 7DLH medium borderline
PHvul10G0001810.1 Alkaloid 7DLH medium borderline
PHvul10G0001860.1 Alkaloid 7DLH medium borderline
PHvul10G0001870.1 Alkaloid 7DLH medium borderline
PHvul10G0004320.1 Alkaloid 7DLH medium borderline
PHvul10G0010050.1 Alkaloid 7DLH medium borderline
PHvul11G0015900.1 Alkaloid 7DLH medium borderline
PHvul11G0015910.1 Alkaloid 7DLH medium borderline
PHvul11G0015930.1 Alkaloid 7DLH medium borderline
PHvul11G0015950.1 Alkaloid 7DLH medium borderline
PHvul11G0015960.1 Alkaloid 7DLH medium borderline
PHvul11G0015980.1 Alkaloid 7DLH medium borderline
PHvul11G0016410.1 Alkaloid 7DLH medium borderline