PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ANR
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Gene Pathway Family Confidence Status
PHvul01G0001260.1 Flavonoid ANR medium borderline
PHvul01G0001270.1 Flavonoid ANR medium borderline
PHvul02G0013990.1 Flavonoid ANR low borderline
PHvul02G0021640.1 Flavonoid ANR medium borderline
PHvul02G0021650.1 Flavonoid ANR medium borderline
PHvul03G0003190.1 Flavonoid ANR medium borderline
PHvul04G0001440.1 Flavonoid ANR low borderline
PHvul05G0003390.1 Flavonoid ANR medium borderline
PHvul05G0003400.1 Flavonoid ANR medium borderline
PHvul05G0003410.1 Flavonoid ANR medium borderline
PHvul05G0003420.1 Flavonoid ANR medium borderline
PHvul05G0003430.1 Flavonoid ANR medium borderline
PHvul05G0003440.1 Flavonoid ANR medium borderline
PHvul05G0003450.1 Flavonoid ANR medium borderline
PHvul05G0008740.1 Flavonoid ANR medium borderline
PHvul05G0015660.1 Flavonoid ANR medium borderline
PHvul06G0011060.1 Flavonoid ANR medium borderline
PHvul07G0023200.1 Flavonoid ANR medium borderline
PHvul08G0007890.1 Flavonoid ANR medium borderline
PHvul08G0007890.2 Flavonoid ANR medium borderline
PHvul08G0007890.3 Flavonoid ANR medium borderline
PHvul08G0007900.1 Flavonoid ANR medium borderline
PHvul08G0007900.2 Flavonoid ANR medium borderline
PHvul08G0007910.1 Flavonoid ANR medium borderline
PHvul08G0007910.2 Flavonoid ANR medium borderline
PHvul08G0007920.1 Flavonoid ANR medium borderline
PHvul08G0025920.1 Flavonoid ANR medium borderline
PHvul08G0025920.2 Flavonoid ANR medium borderline
PHvul08G0025930.1 Flavonoid ANR medium borderline
PHvul08G0025930.2 Flavonoid ANR medium borderline
PHvul08G0025940.1 Flavonoid ANR medium borderline
PHvul08G0025950.1 Flavonoid ANR medium borderline
PHvul09G0008660.1 Flavonoid ANR low borderline
PHvul11G0002240.1 Flavonoid ANR medium borderline
PHvul11G0002250.1 Flavonoid ANR medium borderline
PHvul11G0002260.1 Flavonoid ANR medium borderline
PHvul11G0002270.1 Flavonoid ANR medium borderline
PHvul11G0014070.1 Flavonoid ANR medium borderline
PHvul11G0014070.2 Flavonoid ANR medium borderline
PHvul11G0021210.1 Flavonoid ANR medium borderline
PHvul11G0021230.1 Flavonoid ANR medium borderline
PHvul11G0021230.2 Flavonoid ANR medium borderline