PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status
PHvul01G0000980.2 Phenylpropanoid CSE medium pass
PHvul01G0002480.1 Phenylpropanoid CSE medium pass
PHvul01G0020570.1 Phenylpropanoid CSE medium pass
PHvul02G0022280.1 Phenylpropanoid CSE medium pass
PHvul02G0023610.1 Phenylpropanoid CSE medium pass
PHvul03G0003170.1 Phenylpropanoid CSE medium pass
PHvul03G0013120.1 Phenylpropanoid CSE medium pass
PHvul03G0014160.1 Phenylpropanoid CSE medium pass
PHvul03G0020930.1 Phenylpropanoid CSE medium pass
PHvul03G0024410.1 Phenylpropanoid CSE medium pass
PHvul03G0028220.1 Phenylpropanoid CSE low borderline
PHvul03G0028220.2 Phenylpropanoid CSE low borderline
PHvul03G0028220.3 Phenylpropanoid CSE low borderline
PHvul03G0028220.4 Phenylpropanoid CSE low borderline
PHvul06G0017630.1 Phenylpropanoid CSE medium pass
PHvul06G0017780.1 Phenylpropanoid CSE medium pass
PHvul06G0017800.1 Phenylpropanoid CSE medium pass
PHvul07G0002780.4 Phenylpropanoid CSE medium pass
PHvul07G0009550.1 Phenylpropanoid CSE medium pass
PHvul07G0013260.1 Phenylpropanoid CSE medium pass
PHvul07G0021970.1 Phenylpropanoid CSE medium pass
PHvul09G0000790.1 Phenylpropanoid CSE medium pass
PHvul09G0000800.1 Phenylpropanoid CSE medium pass
PHvul09G0001230.1 Phenylpropanoid CSE medium pass
PHvul09G0001290.1 Phenylpropanoid CSE medium pass
PHvul09G0006920.1 Phenylpropanoid CSE medium pass
PHvul09G0017480.1 Phenylpropanoid CSE medium pass
PHvul09G0023200.1 Phenylpropanoid CSE medium pass
PHvul11G0004320.1 Phenylpropanoid CSE medium pass
PHvul11G0008160.1 Phenylpropanoid CSE medium pass
PHvul11G0012530.1 Phenylpropanoid CSE medium pass
PHvul11G0012560.1 Phenylpropanoid CSE medium pass
PHvul11G0012570.1 Phenylpropanoid CSE medium pass
PHvul11G0012590.1 Phenylpropanoid CSE medium pass
PHvul11G0012600.1 Phenylpropanoid CSE medium pass
PHvul11G0013190.1 Phenylpropanoid CSE medium pass
PHvul11G0013200.1 Phenylpropanoid CSE medium pass
PHvul11G0013390.1 Phenylpropanoid CSE medium pass
PHvul11G0013400.1 Phenylpropanoid CSE medium pass
PHvul11G0013430.1 Phenylpropanoid CSE medium pass
PHvul11G0013450.1 Phenylpropanoid CSE medium pass
PHvul11G0013510.1 Phenylpropanoid CSE medium pass
PHvul11G0013520.1 Phenylpropanoid CSE medium pass
PHvul11G0013590.1 Phenylpropanoid CSE medium pass
PHvul11G0013630.1 Phenylpropanoid CSE medium pass
PHvul11G0013640.1 Phenylpropanoid CSE medium pass