PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2008
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Gene Pathway Family Confidence Status
PHvul01G0004670.1 Phenylpropanoid HCT low borderline
PHvul01G0008720.1 Phenylpropanoid HCT medium pass
PHvul01G0011540.1 Phenylpropanoid HCT medium pass
PHvul01G0011550.1 Phenylpropanoid HCT medium pass
PHvul01G0021620.1 Phenylpropanoid HCT low borderline
PHvul01G0023870.1 Phenylpropanoid HCT low borderline
PHvul01G0023880.1 Phenylpropanoid HCT low borderline
PHvul01G0024280.1 Phenylpropanoid HCT low borderline
PHvul02G0002540.1 Phenylpropanoid HCT medium pass
PHvul02G0016700.1 Phenylpropanoid HCT low borderline
PHvul02G0017490.1 Phenylpropanoid HCT low borderline
PHvul03G0013870.1 Phenylpropanoid HCT medium pass
PHvul03G0013880.1 Phenylpropanoid HCT medium pass
PHvul05G0009770.1 Phenylpropanoid HCT medium pass
PHvul05G0009780.1 Phenylpropanoid HCT medium pass
PHvul05G0009790.1 Phenylpropanoid HCT medium pass
PHvul05G0009800.1 Phenylpropanoid HCT medium pass
PHvul05G0009810.1 Phenylpropanoid HCT medium pass
PHvul05G0009830.1 Phenylpropanoid HCT medium pass
PHvul05G0009840.1 Phenylpropanoid HCT medium pass
PHvul05G0009850.1 Phenylpropanoid HCT medium pass
PHvul05G0017310.1 Phenylpropanoid HCT medium pass
PHvul06G0001850.1 Phenylpropanoid HCT medium pass
PHvul06G0003610.1 Phenylpropanoid HCT medium pass
PHvul06G0003620.1 Phenylpropanoid HCT medium pass
PHvul06G0003640.1 Phenylpropanoid HCT medium pass
PHvul06G0007350.1 Phenylpropanoid HCT low borderline
PHvul06G0009790.1 Phenylpropanoid HCT low borderline
PHvul06G0009820.1 Phenylpropanoid HCT medium pass
PHvul06G0009840.1 Phenylpropanoid HCT low borderline
PHvul07G0026690.1 Phenylpropanoid HCT medium pass
PHvul08G0022620.1 Phenylpropanoid HCT low borderline
PHvul08G0023010.1 Phenylpropanoid HCT low borderline
PHvul09G0016640.1 Phenylpropanoid HCT medium pass
PHvul09G0020550.1 Phenylpropanoid HCT medium pass
PHvul10G0000470.1 Phenylpropanoid HCT low borderline
PHvul10G0016400.1 Phenylpropanoid HCT medium pass