PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Protein/Isoform Record Pathway Family Confidence Status
PHvul09G0008400.1 Rosmarinic Acid C4H low borderline
PHvul09G0017600.1 Rosmarinic Acid C4H low borderline
PHvul09G0017610.1 Rosmarinic Acid C4H low borderline
PHvul09G0017620.1 Rosmarinic Acid C4H low borderline
PHvul09G0020440.1 Rosmarinic Acid C4H low borderline
PHvul09G0024980.1 Rosmarinic Acid C4H low borderline
PHvul09G0024990.1 Rosmarinic Acid C4H low borderline
PHvul09G0025000.1 Rosmarinic Acid C4H low borderline
PHvul09G0025110.1 Rosmarinic Acid C4H low borderline
PHvul10G0001090.1 Rosmarinic Acid C4H medium pass
PHvul10G0001100.1 Rosmarinic Acid C4H medium pass
PHvul10G0001310.1 Rosmarinic Acid C4H low borderline
PHvul10G0001320.1 Rosmarinic Acid C4H low borderline
PHvul10G0001330.1 Rosmarinic Acid C4H low borderline
PHvul10G0001350.1 Rosmarinic Acid C4H low borderline
PHvul10G0001810.1 Rosmarinic Acid C4H low borderline
PHvul10G0002160.1 Rosmarinic Acid C4H low borderline
PHvul10G0002180.1 Rosmarinic Acid C4H low borderline
PHvul10G0002190.1 Rosmarinic Acid C4H low borderline
PHvul10G0004320.1 Rosmarinic Acid C4H low borderline
PHvul10G0006950.1 Rosmarinic Acid C4H low borderline
PHvul10G0006960.1 Rosmarinic Acid C4H low borderline
PHvul10G0007080.1 Rosmarinic Acid C4H medium pass
PHvul10G0007190.1 Rosmarinic Acid C4H medium pass
PHvul10G0007210.1 Rosmarinic Acid C4H low borderline
PHvul10G0007420.1 Rosmarinic Acid C4H low borderline
PHvul10G0007430.1 Rosmarinic Acid C4H low borderline
PHvul10G0008050.1 Rosmarinic Acid C4H medium pass
PHvul10G0011730.1 Rosmarinic Acid C4H low borderline
PHvul10G0012740.1 Rosmarinic Acid C4H low borderline
PHvul10G0012940.1 Rosmarinic Acid C4H medium pass
PHvul10G0013160.1 Rosmarinic Acid C4H low borderline
PHvul10G0014050.1 Rosmarinic Acid C4H low borderline
PHvul11G0001690.1 Rosmarinic Acid C4H low borderline
PHvul11G0007020.1 Rosmarinic Acid C4H medium pass
PHvul11G0009250.1 Rosmarinic Acid C4H low borderline
PHvul11G0015740.1 Rosmarinic Acid C4H low borderline
PHvul11G0015900.1 Rosmarinic Acid C4H low borderline
PHvul11G0015950.1 Rosmarinic Acid C4H low borderline
PHvul11G0015960.1 Rosmarinic Acid C4H low borderline
PHvul11G0016410.1 Rosmarinic Acid C4H low borderline
PHvul11G0017150.1 Rosmarinic Acid C4H low borderline
PHvul11G0021310.1 Rosmarinic Acid C4H low borderline
PHvulscaffold_11580000330.1 Rosmarinic Acid C4H low borderline
PHvulscaffold_170002440.1 Rosmarinic Acid C4H low borderline