PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status
PHvul06G0007740.1 Terpenoid CYP76 medium pass
PHvul06G0007760.1 Terpenoid CYP76 medium pass
PHvul06G0007770.1 Terpenoid CYP76 low borderline
PHvul06G0007820.1 Terpenoid CYP76 medium pass
PHvul06G0012290.1 Terpenoid CYP76 low borderline
PHvul07G0000300.1 Terpenoid CYP76 medium pass
PHvul07G0002570.1 Terpenoid CYP76 medium pass
PHvul07G0008700.1 Terpenoid CYP76 medium borderline
PHvul07G0010570.1 Terpenoid CYP76 low borderline
PHvul07G0010730.1 Terpenoid CYP76 medium borderline
PHvul07G0024300.1 Terpenoid CYP76 medium borderline
PHvul07G0024310.1 Terpenoid CYP76 medium pass
PHvul07G0024320.1 Terpenoid CYP76 medium borderline
PHvul08G0003580.1 Terpenoid CYP76 low borderline
PHvul08G0012930.1 Terpenoid CYP76 medium borderline
PHvul08G0019200.1 Terpenoid CYP76 low borderline
PHvul08G0022850.1 Terpenoid CYP76 low borderline
PHvul08G0024850.1 Terpenoid CYP76 medium pass
PHvul09G0006060.2 Terpenoid CYP76 low borderline
PHvul09G0006240.1 Terpenoid CYP76 medium borderline
PHvul09G0006250.1 Terpenoid CYP76 medium borderline
PHvul09G0006260.1 Terpenoid CYP76 medium borderline
PHvul09G0006270.1 Terpenoid CYP76 medium borderline
PHvul09G0008050.1 Terpenoid CYP76 low borderline
PHvul09G0008050.2 Terpenoid CYP76 medium pass
PHvul09G0011270.1 Terpenoid CYP76 low borderline
PHvul09G0011270.2 Terpenoid CYP76 low borderline
PHvul09G0011270.3 Terpenoid CYP76 low borderline
PHvul09G0017600.1 Terpenoid CYP76 medium pass
PHvul09G0017610.1 Terpenoid CYP76 medium borderline
PHvul09G0017620.1 Terpenoid CYP76 medium borderline
PHvul09G0024980.1 Terpenoid CYP76 medium pass
PHvul09G0024990.1 Terpenoid CYP76 medium pass
PHvul09G0025000.1 Terpenoid CYP76 medium borderline
PHvul09G0025110.1 Terpenoid CYP76 low borderline
PHvul10G0001090.1 Terpenoid CYP76 medium borderline
PHvul10G0001100.1 Terpenoid CYP76 medium borderline
PHvul10G0001310.1 Terpenoid CYP76 medium pass
PHvul10G0001320.1 Terpenoid CYP76 medium pass
PHvul10G0001330.1 Terpenoid CYP76 medium pass
PHvul10G0001350.1 Terpenoid CYP76 medium borderline
PHvul10G0002160.1 Terpenoid CYP76 medium pass
PHvul10G0002180.1 Terpenoid CYP76 medium borderline
PHvul10G0002190.1 Terpenoid CYP76 medium borderline
PHvul10G0005130.1 Terpenoid CYP76 low borderline
PHvul10G0006950.1 Terpenoid CYP76 medium borderline
PHvul10G0006960.1 Terpenoid CYP76 medium pass
PHvul10G0007080.1 Terpenoid CYP76 medium borderline
PHvul10G0007190.1 Terpenoid CYP76 medium borderline
PHvul10G0007210.1 Terpenoid CYP76 low borderline