PlantSME Plant secondary metabolism enzyme database

Phaseolus vulgaris (phaseolus_vulgaris)

Imported from atlas release summary for Phaseolus vulgaris.

2318
Candidate Protein Records
2008
Pathway-Level Records
4679
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 572 20 BAHD (235) View species results
Alkaloid pathway 473 20 7DLGT (83) View species results
Phenylpropanoid pathway 419 11 POD (185) View species results
Flavonoid pathway 279 10 UFGT (189) View species results
Rosmarinic acid pathway 138 7 C4H (60) View species results
Steroid pathway 127 11 CAS (63) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1615 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 366 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Protein/Isoform Record Pathway Family Confidence Status
PHvul05G0006300.2 Steroid DWF4/CYP90B1 low borderline
PHvul05G0006320.1 Steroid DWF4/CYP90B1 low borderline
PHvul06G0000800.1 Steroid DWF4/CYP90B1 low borderline
PHvul06G0004950.1 Steroid DWF4/CYP90B1 low borderline
PHvul06G0007710.1 Steroid DWF4/CYP90B1 medium borderline
PHvul06G0008030.1 Steroid DWF4/CYP90B1 medium borderline
PHvul06G0008040.2 Steroid DWF4/CYP90B1 medium borderline
PHvul06G0008050.1 Steroid DWF4/CYP90B1 medium borderline
PHvul06G0016350.1 Steroid DWF4/CYP90B1 low borderline
PHvul07G0007200.1 Steroid DWF4/CYP90B1 low borderline
PHvul07G0007210.1 Steroid DWF4/CYP90B1 low borderline
PHvul07G0008700.1 Steroid DWF4/CYP90B1 medium borderline
PHvul07G0016510.1 Steroid DWF4/CYP90B1 low borderline
PHvul07G0021550.1 Steroid DWF4/CYP90B1 low borderline
PHvul07G0024320.1 Steroid DWF4/CYP90B1 low borderline
PHvul08G0000570.1 Steroid DWF4/CYP90B1 low borderline
PHvul08G0002950.1 Steroid DWF4/CYP90B1 medium borderline
PHvul08G0002950.2 Steroid DWF4/CYP90B1 medium borderline
PHvul08G0003580.1 Steroid DWF4/CYP90B1 medium borderline
PHvul08G0003590.1 Steroid DWF4/CYP90B1 medium borderline
PHvul08G0005850.1 Steroid DWF4/CYP90B1 low borderline
PHvul08G0019200.1 Steroid DWF4/CYP90B1 medium borderline
PHvul08G0024970.1 Steroid DWF4/CYP90B1 low borderline
PHvul08G0026410.1 Steroid DWF4/CYP90B1 low borderline
PHvul09G0006240.1 Steroid DWF4/CYP90B1 low borderline
PHvul09G0006250.1 Steroid DWF4/CYP90B1 low borderline
PHvul09G0006260.1 Steroid DWF4/CYP90B1 low borderline
PHvul09G0017600.1 Steroid DWF4/CYP90B1 low borderline
PHvul09G0017610.1 Steroid DWF4/CYP90B1 low borderline
PHvul09G0017620.1 Steroid DWF4/CYP90B1 low borderline
PHvul09G0025000.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0001090.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0001100.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0001310.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0001320.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0001330.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0002160.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0006950.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0007420.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0007430.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0008050.1 Steroid DWF4/CYP90B1 low borderline
PHvul10G0012740.1 Steroid DWF4/CYP90B1 low borderline
PHvul11G0003070.1 Steroid DWF4/CYP90B1 low borderline
PHvul11G0009250.1 Steroid DWF4/CYP90B1 low borderline
PHvul11G0015930.1 Steroid DWF4/CYP90B1 low borderline
PHvul11G0015980.1 Steroid DWF4/CYP90B1 low borderline
PHvul11G0017150.1 Steroid DWF4/CYP90B1 low borderline
PHvulscaffold_11580000330.1 Steroid DWF4/CYP90B1 low borderline